Literature DB >> 34415745

Discovery of a Bicyclic Peptidyl Pan-Ras Inhibitor.

Marina Buyanova1, Shurui Cai2, Jahan Cooper1, Curran Rhodes1, Heba Salim1, Ashweta Sahni1, Punit Upadhyaya1, Rui Yang1, Amar Sarkar1, Na Li2, Qi-En Wang2,3, Dehua Pei1,3.   

Abstract

The Ras subfamily of small GTPases is mutated in ∼30% of human cancers and represents compelling yet challenging anticancer drug targets owing to their flat protein surface. We previously reported a bicyclic peptidyl inhibitor, cyclorasin B3, which binds selectively to Ras-GTP with modest affinity and blocks its interaction with downstream effector proteins in vitro but lacks cell permeability or biological activity. In this study, optimization of B3 yielded a potent pan-Ras inhibitor, cyclorasin B4-27, which binds selectively to the GTP-bound forms of wild-type and mutant Ras isoforms (KD = 21 nM for KRasG12V-GppNHp) and is highly cell-permeable and metabolically stable (serum t1/2 > 24 h). B4-27 inhibits Ras signaling in vitro and in vivo by blocking Ras from interacting with downstream effector proteins and induces apoptosis of Ras-mutant cancer cells. When administered systemically (i.v.), B4-27 suppressed tumor growth in two different mouse xenograft models at 1-5 mg/kg of daily doses.

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Year:  2021        PMID: 34415745      PMCID: PMC8429249          DOI: 10.1021/acs.jmedchem.1c01130

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   8.039


  43 in total

1.  Macrocyclic Peptides as Drug Candidates: Recent Progress and Remaining Challenges.

Authors:  Alexander A Vinogradov; Yizhen Yin; Hiroaki Suga
Journal:  J Am Chem Soc       Date:  2019-02-27       Impact factor: 15.419

2.  Biochemical and Structural Analysis of Common Cancer-Associated KRAS Mutations.

Authors:  John C Hunter; Anuj Manandhar; Martin A Carrasco; Deepak Gurbani; Sudershan Gondi; Kenneth D Westover
Journal:  Mol Cancer Res       Date:  2015-06-02       Impact factor: 5.852

3.  Identification of the Clinical Development Candidate MRTX849, a Covalent KRASG12C Inhibitor for the Treatment of Cancer.

Authors:  Jay B Fell; John P Fischer; Brian R Baer; James F Blake; Karyn Bouhana; David M Briere; Karin D Brown; Laurence E Burgess; Aaron C Burns; Michael R Burkard; Harrah Chiang; Mark J Chicarelli; Adam W Cook; John J Gaudino; Jill Hallin; Lauren Hanson; Dylan P Hartley; Erik J Hicken; Gary P Hingorani; Ronald J Hinklin; Macedonio J Mejia; Peter Olson; Jennifer N Otten; Susan P Rhodes; Martha E Rodriguez; Pavel Savechenkov; Darin J Smith; Niranjan Sudhakar; Francis X Sullivan; Tony P Tang; Guy P Vigers; Lance Wollenberg; James G Christensen; Matthew A Marx
Journal:  J Med Chem       Date:  2020-04-06       Impact factor: 7.446

4.  High-throughput screening of one-bead-one-compound libraries: identification of cyclic peptidyl inhibitors against calcineurin/NFAT interaction.

Authors:  Tao Liu; Ziqing Qian; Qing Xiao; Dehua Pei
Journal:  ACS Comb Sci       Date:  2011-08-26       Impact factor: 3.784

5.  Intrinsic GTPase Activity of K-RAS Monitored by Native Mass Spectrometry.

Authors:  Zahra Moghadamchargari; Jamison Huddleston; Mehdi Shirzadeh; Xueyun Zheng; David E Clemmer; Frank M Raushel; David H Russell; Arthur Laganowsky
Journal:  Biochemistry       Date:  2019-07-22       Impact factor: 3.162

6.  Inhibition of Ras signaling by blocking Ras-effector interactions with cyclic peptides.

Authors:  Punit Upadhyaya; Ziqing Qian; Nicholas G Selner; Sarah R Clippinger; Zhengrong Wu; Roger Briesewitz; Dehua Pei
Journal:  Angew Chem Int Ed Engl       Date:  2015-05-07       Impact factor: 15.336

7.  Oncogenic K-ras "addiction" and synthetic lethality.

Authors:  Anurag Singh; Jeff Settleman
Journal:  Cell Cycle       Date:  2009-09-23       Impact factor: 4.534

8.  A Sos proteomimetic as a pan-Ras inhibitor.

Authors:  Seong Ho Hong; Daniel Y Yoo; Louis Conway; Khyle C Richards-Corke; Christopher G Parker; Paramjit S Arora
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-04       Impact factor: 11.205

9.  Discovery of a Direct Ras Inhibitor by Screening a Combinatorial Library of Cell-Permeable Bicyclic Peptides.

Authors:  Thi B Trinh; Punit Upadhyaya; Ziqing Qian; Dehua Pei
Journal:  ACS Comb Sci       Date:  2015-12-23       Impact factor: 3.784

10.  Synergistic effects of concurrent blockade of PI3K and MEK pathways in pancreatic cancer preclinical models.

Authors:  Hua Zhong; Cesar Sanchez; Dirk Spitzer; Dirk Spitrzer; Stacy Plambeck-Suess; Jesse Gibbs; Williams G Hawkins; David Denardo; Feng Gao; Robert A Pufahl; Albert C Lockhart; Mai Xu; David Linehan; Jason Weber; Andrea Wang-Gillam
Journal:  PLoS One       Date:  2013-10-09       Impact factor: 3.240

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  4 in total

Review 1.  The emerging role of selenium metabolic pathways in cancer: New therapeutic targets for cancer.

Authors:  Kalishwaralal Kalimuthu; Chenicheri K Keerthana; Manikandan Mohan; Jaison Arivalagan; Johnson Retnaraj Samuel Selvan Christyraj; Michael A Firer; Mohammad Haroon Asif Choudry; Ruby John Anto; Yong J Lee
Journal:  J Cell Biochem       Date:  2021-12-21       Impact factor: 4.429

Review 2.  Targeting intracellular protein-protein interactions with macrocyclic peptides.

Authors:  Marina Buyanova; Dehua Pei
Journal:  Trends Pharmacol Sci       Date:  2021-12-13       Impact factor: 14.819

3.  De novo designed peptides for cellular delivery and subcellular localisation.

Authors:  Guto G Rhys; Jessica A Cross; William M Dawson; Harry F Thompson; Sooruban Shanmugaratnam; Nigel J Savery; Mark P Dodding; Birte Höcker; Derek N Woolfson
Journal:  Nat Chem Biol       Date:  2022-07-14       Impact factor: 16.174

4.  Accelerated Identification of Cell Active KRAS Inhibitory Macrocyclic Peptides using Mixture Libraries and Automated Ligand Identification System (ALIS) Technology.

Authors:  Michael Garrigou; Bérengère Sauvagnat; Ruchia Duggal; Nicole Boo; Pooja Gopal; Jennifer M Johnston; Anthony Partridge; Tomi Sawyer; Kaustav Biswas; Nicolas Boyer
Journal:  J Med Chem       Date:  2022-06-15       Impact factor: 8.039

  4 in total

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