Literature DB >> 34415297

Molecular design in drug discovery: a comprehensive review of deep generative models.

Yu Cheng1, Yongshun Gong2, Yuansheng Liu1, Bosheng Song1, Quan Zou3.   

Abstract

Deep generative models have been an upsurge in the deep learning community since they were proposed. These models are designed for generating new synthetic data including images, videos and texts by fitting the data approximate distributions. In the last few years, deep generative models have shown superior performance in drug discovery especially de novo molecular design. In this study, deep generative models are reviewed to witness the recent advances of de novo molecular design for drug discovery. In addition, we divide those models into two categories based on molecular representations in silico. Then these two classical types of models are reported in detail and discussed about both pros and cons. We also indicate the current challenges in deep generative models for de novo molecular design. De novo molecular design automatically is promising but a long road to be explored.
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Entities:  

Keywords:  de novo drug design; deep generative model; deep learning; molecular design

Mesh:

Year:  2021        PMID: 34415297     DOI: 10.1093/bib/bbab344

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  5 in total

1.  Potential biomarkers in the fibrosis progression of nonalcoholic steatohepatitis (NASH).

Authors:  Z Wang; Z Zhao; Y Xia; Z Cai; C Wang; Y Shen; R Liu; H Qin; J Jia; G Yuan
Journal:  J Endocrinol Invest       Date:  2022-02-28       Impact factor: 4.256

2.  Immunoglobulin Classification Based on FC* and GC* Features.

Authors:  Hao Wan; Jina Zhang; Yijie Ding; Hetian Wang; Geng Tian
Journal:  Front Genet       Date:  2022-01-24       Impact factor: 4.599

Review 3.  Research on the Computational Prediction of Essential Genes.

Authors:  Yuxin Guo; Ying Ju; Dong Chen; Lihong Wang
Journal:  Front Cell Dev Biol       Date:  2021-12-06

4.  iPiDA-LTR: Identifying piwi-interacting RNA-disease associations based on Learning to Rank.

Authors:  Wenxiang Zhang; Jialu Hou; Bin Liu
Journal:  PLoS Comput Biol       Date:  2022-08-15       Impact factor: 4.779

Review 5.  AOPM: Application of Antioxidant Protein Classification Model in Predicting the Composition of Antioxidant Drugs.

Authors:  Yixiao Zhai; Jingyu Zhang; Tianjiao Zhang; Yue Gong; Zixiao Zhang; Dandan Zhang; Yuming Zhao
Journal:  Front Pharmacol       Date:  2022-01-18       Impact factor: 5.810

  5 in total

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