Literature DB >> 34408318

Opportunities and challenges of macrogenetic studies.

Deborah M Leigh1,2, Charles B van Rees3,4, Katie L Millette5,6,2, Martin F Breed7,8,2, Chloé Schmidt9,2, Laura D Bertola10,11,8,2, Brian K Hand3,2, Margaret E Hunter12,8,2, Evelyn L Jensen13,2, Francine Kershaw14,2, Libby Liggins15,2, Gordon Luikart3,8,2, Stéphanie Manel16,2, Joachim Mergeay17,18,8,2, Joshua M Miller19,2, Gernot Segelbacher20,8,2, Sean Hoban21,22,23, Ivan Paz-Vinas24,25.   

Abstract

The rapidly emerging field of macrogenetics focuses on analysing publicly accessible genetic datasets from thousands of species to explore large-scale patterns and predictors of intraspecific genetic variation. Facilitated by advances in evolutionary biology, technology, data infrastructure, statistics and open science, macrogenetics addresses core evolutionary hypotheses (such as disentangling environmental and life-history effects on genetic variation) with a global focus. Yet, there are important, often overlooked, limitations to this approach and best practices need to be considered and adopted if macrogenetics is to continue its exciting trajectory and reach its full potential in fields such as biodiversity monitoring and conservation. Here, we review the history of this rapidly growing field, highlight knowledge gaps and future directions, and provide guidelines for further research.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34408318     DOI: 10.1038/s41576-021-00394-0

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  118 in total

Review 1.  Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere.

Authors:  Luciano B Beheregaray
Journal:  Mol Ecol       Date:  2008-09       Impact factor: 6.185

2.  Macroecology: the division of food and space among species on continents.

Authors:  J H Brown; B A Maurer
Journal:  Science       Date:  1989-03-03       Impact factor: 47.728

Review 3.  Macrophysiology for a changing world.

Authors:  Steven L Chown; Kevin J Gaston
Journal:  Proc Biol Sci       Date:  2008-07-07       Impact factor: 5.349

Review 4.  Phylogeography's past, present, and future: 10 years after Avise, 2000.

Authors:  M J Hickerson; B C Carstens; J Cavender-Bares; K A Crandall; C H Graham; J B Johnson; L Rissler; P F Victoriano; A D Yoder
Journal:  Mol Phylogenet Evol       Date:  2009-09-13       Impact factor: 4.286

Review 5.  The macroecological contribution to global change solutions.

Authors:  Jeremy T Kerr; Heather M Kharouba; David J Currie
Journal:  Science       Date:  2007-06-15       Impact factor: 47.728

6.  Meta-analysis: synthesizing research findings in ecology and evolution.

Authors:  G Arnqvist; D Wooster
Journal:  Trends Ecol Evol       Date:  1995-06       Impact factor: 17.712

7.  From tropics to tundra: global convergence in plant functioning.

Authors:  P B Reich; M B Walters; D S Ellsworth
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

8.  The Zoogeography of Mammalian Basal Metabolic Rate.

Authors:  Barry G Lovegrove
Journal:  Am Nat       Date:  2000-08       Impact factor: 3.926

9.  Time to Go Bigger: Emerging Patterns in Macrogenetics.

Authors:  Simon Blanchet; Jérôme G Prunier; Hanne De Kort
Journal:  Trends Genet       Date:  2017-07-15       Impact factor: 11.639

10.  A river runs through it: The causes, consequences, and management of intraspecific diversity in river networks.

Authors:  Simon Blanchet; Jérôme G Prunier; Ivan Paz-Vinas; Keoni Saint-Pé; Olivier Rey; Allan Raffard; Eglantine Mathieu-Bégné; Géraldine Loot; Lisa Fourtune; Vincent Dubut
Journal:  Evol Appl       Date:  2020-03-17       Impact factor: 4.929

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  3 in total

1.  Species ecology explains the spatial components of genetic diversity in tropical reef fishes.

Authors:  Giulia Francesca Azzurra Donati; Niklaus Zemp; Stéphanie Manel; Maude Poirier; Thomas Claverie; Franck Ferraton; Théo Gaboriau; Rodney Govinden; Oskar Hagen; Shameel Ibrahim; David Mouillot; Julien Leblond; Pagu Julius; Laure Velez; Irthisham Zareer; Adam Ziyad; Fabien Leprieur; Camille Albouy; Loïc Pellissier
Journal:  Proc Biol Sci       Date:  2021-09-29       Impact factor: 5.530

2.  Phylogeographical Analysis of the Freshwater Gudgeon Huigobio chenhsienensis (Cypriniformes: Gobionidae) in Southern China.

Authors:  Xishu Yang; Xiaomin Ni; Cuizhang Fu
Journal:  Life (Basel)       Date:  2022-07-09

Review 3.  Global genetic diversity status and trends: towards a suite of Essential Biodiversity Variables (EBVs) for genetic composition.

Authors:  Sean Hoban; Frederick I Archer; Laura D Bertola; Jason G Bragg; Martin F Breed; Michael W Bruford; Melinda A Coleman; Robert Ekblom; W Chris Funk; Catherine E Grueber; Brian K Hand; Rodolfo Jaffé; Evelyn Jensen; Jeremy S Johnson; Francine Kershaw; Libby Liggins; Anna J MacDonald; Joachim Mergeay; Joshua M Miller; Frank Muller-Karger; David O'Brien; Ivan Paz-Vinas; Kevin M Potter; Orly Razgour; Cristiano Vernesi; Margaret E Hunter
Journal:  Biol Rev Camb Philos Soc       Date:  2022-04-12
  3 in total

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