| Literature DB >> 34398225 |
Xiaoqin Huang1, Jian Sun1,2, Juleke Majoor3, Koenraad Arndt Vermeer3, Hans Lemij3, Tobias Elze4, Mengyu Wang4, Michael Vincent Boland5, Louis Robert Pasquale6, Vahid Mohammadzadeh7, Kouros Nouri-Mahdavi7, Chris Johnson8, Siamak Yousefi1,9.
Abstract
Purpose: The purpose of this study was to assess the accuracy of artificial neural networks (ANN) in estimating the severity of mean deviation (MD) from peripapillary retinal nerve fiber layer (RNFL) thickness measurements derived from optical coherence tomography (OCT).Entities:
Mesh:
Year: 2021 PMID: 34398225 PMCID: PMC8375007 DOI: 10.1167/tvst.10.9.16
Source DB: PubMed Journal: Transl Vis Sci Technol ISSN: 2164-2591 Impact factor: 3.283
Figure 1.Circle scan around the optic disc of a sample right eye (OD). : A total of 768 A-scans are captured starting from the yellow circle clockwise. : Every 12 A-scans were averaged to generate 64 sectors around the optic disc.
Figure 2.Diagram of the Artificial Neural Network (ANN) model for estimating visual fields from circumpapillary RNFL thickness measurements.
Average Value of RNFL and MD in Training and Three Independent Datasets
| Dataset | RNFL (SD); µm | MD (SD); dB |
|---|---|---|
|
| 71.3 (20.3) | −8.5 (8.4) |
|
| 69.8 (20.0) | −6.7 (7.9) |
|
| 61.0 (13.2) | −9.1 (6.3) |
|
| 83.8 (14.5) | −3.7 (5.1) |
Figure 3.Distribution of eyes in the training and three independent datasets across glaucoma spectrum. : Distribution of eyes based on the global retinal nerve fiber layer thickness. : Distribution of eyes based on visual field mean deviation.
Estimation Error of Different Models Based on the Testing Subset
| MAE (dB) | RMSE (dB) | R-Squared | |
|---|---|---|---|
| (95% Confidence | (95% Confidence | (95% Confidence | |
| Model | Interval) | Interval) | Interval) |
|
|
|
|
|
| RF | 4.0 ( | 5.4 (5.2–5.4) | 0.47 (0.43–0.51) |
| SVR | 4.2 (4.0–4.4) | 5.7 (5.5–5.9) | 0.41 (0.36–0.47) |
| 1-D CNN | 4.1 (3.9–4.3) | 5.5 (5.3–5.7) | 0.45 (0.35–0.54) |
| LR (7 summary parameters) | 5.4 (5.2–5.6) | 6.5 (6.3–6.7) | 0.51 (0.45–0.56) |
| LR (64 sectors) | 5.2 (5.0–5.4) | 6.7 (6.5–6.9) | 0.17 (0.14–0.23) |
Accuracy of the Artificial Neural Network (ANN) Model in Estimating Visual Field Mean Deviation (MD) From Retinal Nerve Fiber Layer (RNFL) Thickness Measurements
| Dataset | Testing | Rotterdam | UCLA | MEE |
|---|---|---|---|---|
|
| 4.0 (3.8, 4.2) | 3.3 (2.77, 3.83) | 3.9 (3.58, 4.36) | 5.9 (5.3, 6.6) |
|
| 5.2 (5.1, 5.4) | 4.4 (3.72, 5.08) | 5.3 (4.88, 5.83) | 8.4 (7.4, 10.4) |
|
| 3.1 (2.7, 3.7) | 2.6 (2.23, 3.16) | 2.9 (2.58, 3.37) | 3.5 (3.1, 4.9) |
|
| 0.81 (0.80, 0.83) | 0.84 (0.81, 0.86 | 0.61 (0.52, 0.68) | 0.62 (0.57, 0.66) |
|
| 0.64 (0.59, 0.68) | 0.67 (0.47, 0.86) | 0.30 (0.11, 0.43) | −1.74 (−2.86, −0.77) |
Figure 4.Scatter plots of the true versus estimated mean deviations (MD) of the testing dataset. : Outcome of the Artificial Neural Network model based on 64 RNFL sectors. : Outcome of the linear regression based on seven RNFL summary parameters.
Figure 5.Scatter plots of the true versus estimated mean deviations (MD) of the ANN model based on independent subsets. : A subset with 691 visual fields and OCT pairs from Rotterdam eye hospital. : A subset with 256 visual fields and OCT pairs from UCLA. : A subset with 691 visual fields and OCT pairs from MEE. The MEE subset included Cirrus cube scans while other subsets included Spectralis circle scans.
Accuracy of the Artificial Neural Network Model in Estimating Mean Deviation (MD) From Retinal Nerve Fiber Layer (RNFL) Thickness Measurements for Eyes in the Early (MD ≥ −6) and Moderately Severe to Advanced (MD < −6) Stages of Glaucoma
| Dataset | Testing | Rotterdam | UCLA | MEE | ||||
|---|---|---|---|---|---|---|---|---|
|
| MD ≥ –6 | MD < –6 | MD ≥ –6 | MD < –6 | MD ≥ –6 | MD < –6 | MD ≥ –6 | MD < –6 |
|
| 3.6 (3.3, 4.3) | 4.6 (4.5, 4.8) | 2.8 (2.4, 3.3) | 4.2 (3.5, 4.9) | 2.4 (1.9, 3.1) | 4.9 (4.6, 5.2) | 5.0 (4.5, 5.5) | 10.0 (8.6, 11.6) |
|
| 4.8 (4.3, 5.5) | 5.9 (5.7, 6.1) | 3.9 (3.4, 4.5) | 5.2 (4.3, 6.1) | 3.1 (2.5, 3.9) | 6.4 (5.9, 6.8) | 7.4 (6.7, 8.1) | 11.9 (10.2, 13.8) |
|
| 3.0 (2.8, 4.0) | 3.7 (3.6, 3.8) | 2.1 (1.8, 3.2) | 3.7 (3.1, 4.1) | 2.0 (1.3, 2.6) | 4.0 (3.5, 4.4) | 2.8 (2.5, 3.1) | 8.9 (7.1, 11.1) |
Ablation Rest on Artificial Neural Network (ANN) Based on the Testing Subset
| Sectors Excluded | R2 (95% Confidence Interval) |
|---|---|
| None | 0.64 (0.59, 0.68) |
| 1–10 | 0.62 (0.56–0.67) |
| 1–20 | 0.59 (0.52–0.65) |
| 1–30 | 0.57 (0.50–0.63) |
| 1–40 | 0.51 (0.40–0.59) |
| 41–50 | 0.55 (0.48–0.62) |
| 51–60 | 0.60 (0.52–0.66) |
| 41–60 | 0.46 (0.37–0.53) |
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Figure 6.Feature (sector) ranking based on the random forest regressor (RF) model. : Sectors that were more important in estimating visual field mean deviation from 64 RNFL sectors. : Importance sectors were color coded and superimposed on fundus photograph to provide a user-friendly visualization. More important sectors are presented in greenish colors.