Literature DB >> 34395802

Identifying Protein Interactions with Histone Peptides Using Bio-layer Interferometry.

Bingbing Ren1, Ahmed Mahmoud Mohammed Sayed2, Hwei Ling Tan1,3, Yu Keung Mok2, Ee Sin Chen1,3.   

Abstract

Histone post-translational modifications (PTMs) regulate numerous cellular processes, including gene transcription, cell division, and DNA damage repair. Most histone PTMs affect the recruitment or exclusion of reader proteins from chromatin. Here, we present a protocol to measure affinity and interaction kinetics between histone peptides and the recombinant protein using Bio-layer interferometry.
Copyright © 2018 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Bio-layer interferometry; Biosensor; Histone post-translational modification; Label free; Peptide; Protein interaction; Recombinant protein

Year:  2018        PMID: 34395802      PMCID: PMC8328593          DOI: 10.21769/BioProtoc.3012

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  20 in total

1.  Purification of proteins using polyhistidine affinity tags.

Authors:  J A Bornhorst; J J Falke
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

Review 2.  Epigenetic regulation by histone methylation and histone variants.

Authors:  Peter Cheung; Priscilla Lau
Journal:  Mol Endocrinol       Date:  2005-01-27

3.  Effect of temperature on protein quality in bacterial inclusion bodies.

Authors:  Natalia Sánchez de Groot; Salvador Ventura
Journal:  FEBS Lett       Date:  2006-11-10       Impact factor: 4.124

Review 4.  Signals and combinatorial functions of histone modifications.

Authors:  Tamaki Suganuma; Jerry L Workman
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

5.  Designing binding kinetic assay on the bio-layer interferometry (BLI) biosensor to characterize antibody-antigen interactions.

Authors:  Vishal Kamat; Ashique Rafique
Journal:  Anal Biochem       Date:  2017-08-10       Impact factor: 3.365

Review 6.  Ten principles of heterochromatin formation and function.

Authors:  Robin C Allshire; Hiten D Madhani
Journal:  Nat Rev Mol Cell Biol       Date:  2017-12-13       Impact factor: 94.444

7.  Evaluation of pre-induction temperature, cell growth at induction and IPTG concentration on the expression of a leptospiral protein in E. coli using shaking flasks and microbioreactor.

Authors:  Ariane Leites Larentis; Júlia Fabiana Monteiro Quintal Nicolau; Gabriela dos Santos Esteves; Daniel Tait Vareschini; Fernanda Vicente Ribeiro de Almeida; Mitermayer Galvão dos Reis; Ricardo Galler; Marco Alberto Medeiros
Journal:  BMC Res Notes       Date:  2014-09-25

8.  Proteomics to study DNA-bound and chromatin-associated gene regulatory complexes.

Authors:  Michael Wierer; Matthias Mann
Journal:  Hum Mol Genet       Date:  2016-07-11       Impact factor: 6.150

Review 9.  Strategies Using Bio-Layer Interferometry Biosensor Technology for Vaccine Research and Development.

Authors:  Rejane L Petersen
Journal:  Biosensors (Basel)       Date:  2017-10-31

10.  Regulation of transcriptional silencing and chromodomain protein localization at centromeric heterochromatin by histone H3 tyrosine 41 phosphorylation in fission yeast.

Authors:  Bingbing Ren; Hwei Ling Tan; Thi Thuy Trang Nguyen; Ahmed Mahmoud Mohammed Sayed; Ying Li; Yu-Keung Mok; Henry Yang; Ee Sin Chen
Journal:  Nucleic Acids Res       Date:  2018-01-09       Impact factor: 16.971

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