Literature DB >> 34392363

Machine Assist for Pediatric Posterior Fossa Tumor Diagnosis: A Multinational Study.

Michael Zhang1,2, Samuel W Wong3, Jason N Wright4,5, Sebastian Toescu6, Maryam Mohammadzadeh7, Michelle Han8, Seth Lummus9, Matthias W Wagner10, Derek Yecies11, Hollie Lai12, Azam Eghbal12, Alireza Radmanesh13, Jordan Nemelka14, Stephen Harward15, Michael Malinzak16, Suzanne Laughlin10, Sebastien Perreault17, Kristina R M Braun18, Arastoo Vossough19, Tina Poussaint20, Robert Goetti21, Birgit Ertl-Wagner10, Chang Y Ho18, Ozgur Oztekin22,23, Vijay Ramaswamy24, Kshitij Mankad25, Nicholas A Vitanza26, Samuel H Cheshier14, Mourad Said27, Kristian Aquilina6, Eric Thompson15, Alok Jaju28, Gerald A Grant11, Robert M Lober29, Kristen W Yeom2.   

Abstract

BACKGROUND: Clinicians and machine classifiers reliably diagnose pilocytic astrocytoma (PA) on magnetic resonance imaging (MRI) but less accurately distinguish medulloblastoma (MB) from ependymoma (EP). One strategy is to first rule out the most identifiable diagnosis.
OBJECTIVE: To hypothesize a sequential machine-learning classifier could improve diagnostic performance by mimicking a clinician's strategy of excluding PA before distinguishing MB from EP.
METHODS: We extracted 1800 total Image Biomarker Standardization Initiative (IBSI)-based features from T2- and gadolinium-enhanced T1-weighted images in a multinational cohort of 274 MB, 156 PA, and 97 EP. We designed a 2-step sequential classifier - first ruling out PA, and next distinguishing MB from EP. For each step, we selected the best performing model from 6-candidate classifier using a reduced feature set, and measured performance on a holdout test set with the microaveraged F1 score.
RESULTS: Optimal diagnostic performance was achieved using 2 decision steps, each with its own distinct imaging features and classifier method. A 3-way logistic regression classifier first distinguished PA from non-PA, with T2 uniformity and T1 contrast as the most relevant IBSI features (F1 score 0.8809). A 2-way neural net classifier next distinguished MB from EP, with T2 sphericity and T1 flatness as most relevant (F1 score 0.9189). The combined, sequential classifier was with F1 score 0.9179.
CONCLUSION: An MRI-based sequential machine-learning classifiers offer high-performance prediction of pediatric posterior fossa tumors across a large, multinational cohort. Optimization of this model with demographic, clinical, imaging, and molecular predictors could provide significant advantages for family counseling and surgical planning. © Congress of Neurological Surgeons 2021.

Entities:  

Keywords:  Artificial intelligence; Ependymoma; Machine learning; Medulloblastoma; Pilocytic astrocytoma; Posterior fossa tumors; Radiomics

Mesh:

Year:  2021        PMID: 34392363      PMCID: PMC8764569          DOI: 10.1093/neuros/nyab311

Source DB:  PubMed          Journal:  Neurosurgery        ISSN: 0148-396X            Impact factor:   5.315


  15 in total

1.  Automatic Machine Learning to Differentiate Pediatric Posterior Fossa Tumors on Routine MR Imaging.

Authors:  H Zhou; R Hu; O Tang; C Hu; L Tang; K Chang; Q Shen; J Wu; B Zou; B Xiao; J Boxerman; W Chen; R Y Huang; L Yang; H X Bai; C Zhu
Journal:  AJNR Am J Neuroradiol       Date:  2020-07       Impact factor: 3.825

Review 2.  Imaging Features of Common Pediatric Intracranial Tumours: A Primer for the Radiology Trainee.

Authors:  Daddy Mata-Mbemba; John Donnellan; Pradeep Krishnan; Manohar Shroff; Prakash Muthusami
Journal:  Can Assoc Radiol J       Date:  2017-12-22       Impact factor: 2.248

Review 3.  Posterior Fossa Tumors.

Authors:  Lara A Brandão; Tina Young Poussaint
Journal:  Neuroimaging Clin N Am       Date:  2017-02       Impact factor: 2.264

Review 4.  Brain tumors in children.

Authors:  I F Pollack
Journal:  N Engl J Med       Date:  1994-12-01       Impact factor: 91.245

Review 5.  Posterior fossa tumors in children: developmental anatomy and diagnostic imaging.

Authors:  Charles Raybaud; Vijay Ramaswamy; Michael D Taylor; Suzanne Laughlin
Journal:  Childs Nerv Syst       Date:  2015-09-09       Impact factor: 1.475

6.  Differentiation Between Ependymoma and Medulloblastoma in Children with Radiomics Approach.

Authors:  Jie Dong; Lei Li; Shengxiang Liang; Shujun Zhao; Bin Zhang; Yun Meng; Yong Zhang; Suxiao Li
Journal:  Acad Radiol       Date:  2020-03-26       Impact factor: 3.173

7.  Metrics and textural features of MRI diffusion to improve classification of pediatric posterior fossa tumors.

Authors:  D Rodriguez Gutierrez; A Awwad; L Meijer; M Manita; T Jaspan; R A Dineen; R G Grundy; D P Auer
Journal:  AJNR Am J Neuroradiol       Date:  2013-12-05       Impact factor: 3.825

Review 8.  Radiomics in Glioblastoma: Current Status and Challenges Facing Clinical Implementation.

Authors:  Ahmad Chaddad; Michael Jonathan Kucharczyk; Paul Daniel; Siham Sabri; Bertrand J Jean-Claude; Tamim Niazi; Bassam Abdulkarim
Journal:  Front Oncol       Date:  2019-05-21       Impact factor: 6.244

9.  FET PET Radiomics for Differentiating Pseudoprogression from Early Tumor Progression in Glioma Patients Post-Chemoradiation.

Authors:  Philipp Lohmann; Mai A Elahmadawy; Robin Gutsche; Jan-Michael Werner; Elena K Bauer; Garry Ceccon; Martin Kocher; Christoph W Lerche; Marion Rapp; Gereon R Fink; Nadim J Shah; Karl-Josef Langen; Norbert Galldiks
Journal:  Cancers (Basel)       Date:  2020-12-18       Impact factor: 6.639

10.  The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping.

Authors:  Alex Zwanenburg; Martin Vallières; Mahmoud A Abdalah; Hugo J W L Aerts; Vincent Andrearczyk; Aditya Apte; Saeed Ashrafinia; Spyridon Bakas; Roelof J Beukinga; Ronald Boellaard; Marta Bogowicz; Luca Boldrini; Irène Buvat; Gary J R Cook; Christos Davatzikos; Adrien Depeursinge; Marie-Charlotte Desseroit; Nicola Dinapoli; Cuong Viet Dinh; Sebastian Echegaray; Issam El Naqa; Andriy Y Fedorov; Roberto Gatta; Robert J Gillies; Vicky Goh; Michael Götz; Matthias Guckenberger; Sung Min Ha; Mathieu Hatt; Fabian Isensee; Philippe Lambin; Stefan Leger; Ralph T H Leijenaar; Jacopo Lenkowicz; Fiona Lippert; Are Losnegård; Klaus H Maier-Hein; Olivier Morin; Henning Müller; Sandy Napel; Christophe Nioche; Fanny Orlhac; Sarthak Pati; Elisabeth A G Pfaehler; Arman Rahmim; Arvind U K Rao; Jonas Scherer; Muhammad Musib Siddique; Nanna M Sijtsema; Jairo Socarras Fernandez; Emiliano Spezi; Roel J H M Steenbakkers; Stephanie Tanadini-Lang; Daniela Thorwarth; Esther G C Troost; Taman Upadhaya; Vincenzo Valentini; Lisanne V van Dijk; Joost van Griethuysen; Floris H P van Velden; Philip Whybra; Christian Richter; Steffen Löck
Journal:  Radiology       Date:  2020-03-10       Impact factor: 29.146

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