| Literature DB >> 34390598 |
Andrea Leonardi1, Umberto Rosani2, Fabiano Cavarzeran1, Philippe Daull3, Jean-Sebastien Garrigue3, Brun Paola4.
Abstract
Entities:
Keywords: ACE2; COVID-19; SARS-CoV-2; antiviral factors; vernal keratoconjuntivitis
Mesh:
Substances:
Year: 2021 PMID: 34390598 PMCID: PMC8441822 DOI: 10.1111/all.15048
Source DB: PubMed Journal: Allergy ISSN: 0105-4538 Impact factor: 14.710
Significantly overexpressed antiviral genes in VKC compared with control (CTRL)
| Transcript cluster id | Symbol | Description | VKC vs CTRL FC |
|
|---|---|---|---|---|
| TC0100015921.hg.1 | ADAR | Adenosine deaminase, RNA‐specific | 2.62 | .0016 |
| TC1100006500.hg.1 | AP2A2 | Adaptor‐related protein complex 2, alpha 2 subunit | 2.79 | .0000 |
| TC2200009268.hg.1 | APOBEC3A | Apolipoprotein B mRNA editing enzyme, catalytic polypeptide‐like 3A | 1.42 | .0045 |
| TC2200009271.hg.1 | APOBEC3C | Apolipoprotein B mRNA editing enzyme, catalytic polypeptide‐like 3C | 2.19 | .0069 |
| TC1900009859.hg.1 | BRD4 | Bromodomain containing 4 | 2.78 | .0061 |
| TC1900009970.hg.1 | BST2 | Bone marrow stromal cell antigen 2 | 11.59 | .0016 |
| TC0500012470.hg.1 | CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain | 4.03 | .0107 |
| TC1700010698.hg.1 | CNP | Memczak2013 ANTISENSE, CDS, coding, INTERNAL best transcript NM_033133 | 1.77 | .0052 |
| TC1100006840.hg.1 | CTR9 | CTR9 homolog, Paf1 | 1.41 | .0534 |
| TC0200012257.hg.1 | EIF2AK2 | Eukaryotic translation initiation factor 2‐alpha kinase 2 | 2.74 | .0028 |
| TC1100012949.hg.1 | IFITM1 | Interferon induced transmembrane protein 1 | 3.33 | .0417 |
| TC0500012017.hg.1 | IRF1 | Interferon regulatory factor 1 | 2.83 | .0382 |
| TC1600008712.hg.1 | IRF8 | Interferon regulatory factor 8 | 1.65 | .0456 |
| TC1400010584.hg.1 | IRF9 | Interferon regulatory factor 9 | 1.52 | .0442 |
| TC0100010244.hg.1 | IFI16 | Interferon, gamma‐inducible protein 16 | 2.83 | .0005 |
| TC0200014772.hg.1 | IFIH1 | Interferon induced, with helicase C domain 1 | 4.64 | .0009 |
| TC0100006483.hg.1 | ISG15 | ISG15 ubiquitin‐like modifier | 5.91 | .0371 |
| TC1700011922.hg.1 | LGALS3BP | Lectin, galactoside‐binding, soluble, 3 binding protein | 3.07 | .0018 |
| TC0100009449.hg.1 | MOV10 | Mov10 RISC complex RNA helicase | 2.16 | .0027 |
| TC2100007205.hg.1 | MX2 | MX dynamin‐like GTPase 2 | 14.65 | .0027 |
| TC2000009023.hg.1 | SAMHD1 | SAM domain and HD domain 1 | 3.20 | .0014 |
| TC1200010908.hg.1 | STAT2 | Signal transducer and activator of transcription 2 | 3.69 | .0001 |
| TC0600009597.hg.1 | TNFAIP3 | Tumor necrosis factor, alpha‐induced protein 3 | 9.75 | .0015 |
| TC0800007007.hg.1 | TNFRSF10C | Tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain | 2.50 | .0415 |
| TC1100009940.hg.1 | TRIM5 | Tripartite motif containing 5 | 1.66 | .0231 |
| TC0100017612.hg.1 | TRIM11 | Tripartite motif containing 11 | 1.56 | .0079 |
| TC0900010968.hg.1 | TRIM14 | Tripartite motif containing 14 | 1.83 | .0151 |
| TC1700007135.hg.1 | TRIM16L | Tripartite motif containing 16‐like | 2.13 | .0246 |
| TC1100009942.hg.1 | TRIM22 | Memczak2013 ANTISENSE, CDS, coding, INTERNAL, UTR5 best transcript NM_001199573 | 2.44 | .0007 |
| TC1100012957.hg.1 | TRIM22 | Tripartite motif containing 22 | 2.25 | .0189 |
| TC1700011208.hg.1 | TRIM25 | Tripartite motif containing 25 | 2.08 | .0040 |
| TC0600011351.hg.1 | TRIM31 | Tripartite motif containing 31 | 4.89 | .0504 |
| TC0100015346.hg.1 | TRIM33 | Tripartite motif containing 33 | 1.41 | .0385 |
| TC0600007257.hg.1 | TRIM38 | Tripartite motif containing 38 | 2.06 | .0477 |
| TC0500009762.hg.1 | TRIM41 | tripartite motif containing 41 | 1.85 | .0434 |
| TC0700008579.hg.1 | TRIM56 | tripartite motif containing 56 | 2.47 | .0397 |
| TC0100012328.hg.1 | TRIM58 | tripartite motif containing 58 | 2.58 | .0037 |
| TC0100007832.hg.1 | ZC3H12A | Zinc finger CCCH‐type containing 12A | 3.71 | .0024 |
Abbreviations: CTR, controls; FC, fold change; VKC, vernal keratoconjunctivitis.
FIGURE 1Histogram showing the levels of expression of selected genes in VKC patients and control subjects (CTRL). The selection includes genes involved in the antiviral response. VKC, vernal keratoconjunctivitis