Literature DB >> 34388751

Embedded nanometer position tracking based on enhanced phasor analysis.

Hongqiang Ma, Yang Liu.   

Abstract

We present an embedded real-time 1D position tracking device at a nanometer precision. The embedded algorithm extracts the most appropriate region of the signal without manual intervention and estimates the position based on the phase shift from the signal's first Fourier harmonic. Using simulated datasets, we demonstrate that the proposed approach can achieve a similar precision to the state-of-the-art maximum likelihood fitting-based method while executing over four orders of magnitude faster. We further implemented this algorithm on a low-power microprocessor and developed a simple, compact, and low-cost embedded position tracking device. We demonstrate nanometer tracking precision in real-time drift tracking experiments.

Entities:  

Year:  2021        PMID: 34388751      PMCID: PMC8622170          DOI: 10.1364/OL.433740

Source DB:  PubMed          Journal:  Opt Lett        ISSN: 0146-9592            Impact factor:   3.560


  13 in total

1.  Fast Fourier domain localization algorithm of a single molecule with nanometer precision.

Authors:  Bin Yu; Danni Chen; Junle Qu; Hanben Niu
Journal:  Opt Lett       Date:  2011-11-15       Impact factor: 3.776

2.  Spectral phasor analysis allows rapid and reliable unmixing of fluorescence microscopy spectral images.

Authors:  Farzad Fereidouni; Arjen N Bader; Hans C Gerritsen
Journal:  Opt Express       Date:  2012-06-04       Impact factor: 3.894

3.  QuickPALM: 3D real-time photoactivation nanoscopy image processing in ImageJ.

Authors:  Ricardo Henriques; Mickael Lelek; Eugenio F Fornasiero; Flavia Valtorta; Christophe Zimmer; Musa M Mhlanga
Journal:  Nat Methods       Date:  2010-05       Impact factor: 28.547

4.  Locally adaptive thresholding centroid localization in confocal microscopy.

Authors:  Cheng Chen; Richard Leach; Jian Wang; Xiaojun Liu; Xiangqian Jiang; Wenlong Lu
Journal:  Opt Lett       Date:  2021-04-01       Impact factor: 3.776

5.  A Simple Marker-Assisted 3D Nanometer Drift Correction Method for Superresolution Microscopy.

Authors:  Hongqiang Ma; Jianquan Xu; Jingyi Jin; Yi Huang; Yang Liu
Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

Review 6.  Precisely and accurately localizing single emitters in fluorescence microscopy.

Authors:  Hendrik Deschout; Francesca Cella Zanacchi; Michael Mlodzianoski; Alberto Diaspro; Joerg Bewersdorf; Samuel T Hess; Kevin Braeckmans
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

7.  Super-resolution localization microscopy: Toward high throughput, high quality, and low cost.

Authors:  Hongqiang Ma; Yang Liu
Journal:  APL Photonics       Date:  2020-06-24

8.  Phasor based single-molecule localization microscopy in 3D (pSMLM-3D): An algorithm for MHz localization rates using standard CPUs.

Authors:  Koen J A Martens; Arjen N Bader; Sander Baas; Bernd Rieger; Johannes Hohlbein
Journal:  J Chem Phys       Date:  2018-03-28       Impact factor: 3.488

9.  WindSTORM: Robust online image processing for high-throughput nanoscopy.

Authors:  Hongqiang Ma; Jianquan Xu; Yang Liu
Journal:  Sci Adv       Date:  2019-04-26       Impact factor: 14.136

10.  Ultraprecise single-molecule localization microscopy enables in situ distance measurements in intact cells.

Authors:  Simao Coelho; Jongho Baek; Matthew S Graus; James M Halstead; Philip R Nicovich; Kristen Feher; Hetvi Gandhi; J Justin Gooding; Katharina Gaus
Journal:  Sci Adv       Date:  2020-04-17       Impact factor: 14.136

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