Literature DB >> 34387327

X-factors in human disease: impact of gene content and dosage regulation.

He Fang1, Xinxian Deng1, Christine M Disteche1,2.   

Abstract

The gene content of the X and Y chromosomes has dramatically diverged during evolution. The ensuing dosage imbalance within the genome of males and females has led to unique chromosome-wide regulatory mechanisms with significant and sex-specific impacts on X-linked gene expression. X inactivation or silencing of most genes on one X chromosome chosen at random in females profoundly affects the manifestation of X-linked diseases, as males inherit a single maternal allele, while females express maternal and paternal alleles in a mosaic manner. An additional complication is the existence of genes that escape X inactivation and thus are ubiquitously expressed from both alleles in females. The mosaic nature of X-linked gene expression and the potential for escape can vary between individuals, tissues, cell types and stages of life. Our understanding of the specialized nature of X-linked genes and of the multilayer epigenetic regulation that influence their expression throughout the organism has been helped by molecular studies conducted by tissue-specific and single-cell-specific approaches. In turn, the definition of molecular events that control X silencing has helped develop new approaches for the treatment of some X-linked disorders. This review focuses on the peculiarities of the X chromosome genetic content and epigenetic regulation in shaping the manifestation of congenital and acquired X-linked disorders in a sex-specific manner.
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Year:  2021        PMID: 34387327      PMCID: PMC8490017          DOI: 10.1093/hmg/ddab221

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   5.121


  129 in total

1.  The dynamics of X-inactivation skewing as women age.

Authors:  C Hatakeyama; C L Anderson; C L Beever; M S Peñaherrera; C J Brown; W P Robinson
Journal:  Clin Genet       Date:  2004-10       Impact factor: 4.438

2.  A promoter mutation in the XIST gene in two unrelated families with skewed X-chromosome inactivation.

Authors:  R M Plenge; B D Hendrich; C Schwartz; J F Arena; A Naumova; C Sapienza; R M Winter; H F Willard
Journal:  Nat Genet       Date:  1997-11       Impact factor: 38.330

3.  The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome.

Authors:  R S Hansen; C Wijmenga; P Luo; A M Stanek; T K Canfield; C M Weemaes; S M Gartler
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

4.  Human inactive X chromosome is compacted through a PRC2-independent SMCHD1-HBiX1 pathway.

Authors:  Ryu-Suke Nozawa; Koji Nagao; Ken-Taro Igami; Sachiko Shibata; Natsuko Shirai; Naohito Nozaki; Takashi Sado; Hiroshi Kimura; Chikashi Obuse
Journal:  Nat Struct Mol Biol       Date:  2013-03-31       Impact factor: 15.369

5.  Landscape of X chromosome inactivation across human tissues.

Authors:  Taru Tukiainen; Alexandra-Chloé Villani; Angela Yen; Manuel A Rivas; Jamie L Marshall; Rahul Satija; Matt Aguirre; Laura Gauthier; Mark Fleharty; Andrew Kirby; Beryl B Cummings; Stephane E Castel; Konrad J Karczewski; François Aguet; Andrea Byrnes; Tuuli Lappalainen; Aviv Regev; Kristin G Ardlie; Nir Hacohen; Daniel G MacArthur
Journal:  Nature       Date:  2017-10-11       Impact factor: 49.962

Review 6.  Neurocognitive outcomes of individuals with a sex chromosome trisomy: XXX, XYY, or XXY: a systematic review.

Authors:  Victoria Leggett; Patricia Jacobs; Kate Nation; Gaia Scerif; Dorothy V M Bishop
Journal:  Dev Med Child Neurol       Date:  2010-01-05       Impact factor: 5.449

7.  Cellular interference in craniofrontonasal syndrome: males mosaic for mutations in the X-linked EFNB1 gene are more severely affected than true hemizygotes.

Authors:  Stephen R F Twigg; Christian Babbs; Marijke E P van den Elzen; Anne Goriely; Stephen Taylor; Simon J McGowan; Eleni Giannoulatou; Lorne Lonie; Jiannis Ragoussis; Elham Sadighi Akha; Samantha J L Knight; Roseli M Zechi-Ceide; Jeannette A M Hoogeboom; Barbara R Pober; Helga V Toriello; Steven A Wall; M Rita Passos-Bueno; Han G Brunner; Irene M J Mathijssen; Andrew O M Wilkie
Journal:  Hum Mol Genet       Date:  2013-01-17       Impact factor: 6.150

8.  Widespread DNA hypomethylation and differential gene expression in Turner syndrome.

Authors:  Christian Trolle; Morten Muhlig Nielsen; Anne Skakkebæk; Philippe Lamy; Søren Vang; Jakob Hedegaard; Iver Nordentoft; Torben Falck Ørntoft; Jakob Skou Pedersen; Claus Højbjerg Gravholt
Journal:  Sci Rep       Date:  2016-09-30       Impact factor: 4.379

9.  Loss of Xist RNA from the inactive X during B cell development is restored in a dynamic YY1-dependent two-step process in activated B cells.

Authors:  Camille M Syrett; Vishal Sindhava; Suchita Hodawadekar; Arpita Myles; Guanxiang Liang; Yue Zhang; Satabdi Nandi; Michael Cancro; Michael Atchison; Montserrat C Anguera
Journal:  PLoS Genet       Date:  2017-10-09       Impact factor: 5.917

10.  Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation.

Authors:  Giancarlo Bonora; Vijay Ramani; Ritambhara Singh; He Fang; Dana L Jackson; Sanjay Srivatsan; Ruolan Qiu; Choli Lee; Cole Trapnell; Jay Shendure; Zhijun Duan; Xinxian Deng; William S Noble; Christine M Disteche
Journal:  Genome Biol       Date:  2021-09-27       Impact factor: 13.583

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  1 in total

Review 1.  X chromosome agents of sexual differentiation.

Authors:  Arthur P Arnold
Journal:  Nat Rev Endocrinol       Date:  2022-06-15       Impact factor: 47.564

  1 in total

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