| Literature DB >> 34387310 |
Daniel B Horton1,2,3, Emily S Barrett3,4, Jason Roy3, Maria Laura Gennaro5, Tracy Andrews3, Patricia Greenberg3, Natalie Bruiners5, Pratik Datta5, Rahul Ukey5, Senthil K Velusamy6, Daniel Fine6, William J Honnen5, Yue Sandra Yin7, Abraham Pinter5, Andrew Brooks8,9,10, Jay Tischfield8,9,10, Sabiha Hussain11, Sugeet Jagpal11, Shobha Swaminathan12, Veenat Parmar11, Nancy Reilly13, Sunanda Gaur1, Reynold A Panettieri11,13, Jeffrey L Carson11, Martin J Blaser7.
Abstract
BACKGROUND: We studied risk factors, antibodies, and symptoms of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection in a diverse, ambulatory population.Entities:
Keywords: COVID-19; SARS-CoV-2 infection; humoral immunity; longitudinal data analysis; postacute sequelae of COVID-19; prospective cohort; risk factors; symptoms
Mesh:
Substances:
Year: 2021 PMID: 34387310 PMCID: PMC8436370 DOI: 10.1093/infdis/jiab411
Source DB: PubMed Journal: J Infect Dis ISSN: 0022-1899 Impact factor: 7.759
Characteristics of Rutgers Corona Cohort Study Participants Stratified by SARS-CoV-2 Test Results
| Characteristics | All (n = 831) | Ever Positive (n = 93, 11.2%) | Never Positive (n = 738, 88.8%) | P Value |
|---|---|---|---|---|
| Female | 533 (64.1) | 66 (71.0) | 467 (63.3) | .15 |
| Age, y | .52 | |||
| 20–39 | 430 (51.7) | 50 (53.8) | 380 (51.5) | |
| 40–59 | 315 (37.9) | 31 (33.3) | 284 (38.5) | |
| ≥60 | 86 (10.3) | 12 (12.9) | 74 (10.0) | |
| Race | .03 | |||
| White | 483 (58.6) | 53 (58.9) | 430 (58.6) | |
| Asian | 171 (20.8) | 10 (11.1) | 161 (21.9) | |
| Black | 90 (10.9) | 15 (16.7) | 75 (10.2) | |
| Other | 80 (9.71) | 12 (13.3) | 68 (9.26) | |
| Hispanic/Latino ethnicity | 101 (12.2) | 19 (20.4) | 82 (11.1) | .01 |
| Residence in high-risk zip code | 101 (12.6) | 6 (6.59) | 95 (13.3) | .18 |
| Child < 18 y in the home | 326 (39.2) | 36 (38.7) | 290 (39.3) | .91 |
| Smoking | .21 | |||
| Current | 37 (4.47) | 4 (4.30) | 33 (4.49) | |
| Former | 230 (27.8) | 33 (35.5) | 197 (26.8) | |
| Chronic illness | 376 (45.2) | 51 (54.8) | 325 (44.0) | .05 |
| Obesity | 188 (22.8) | 31 (33.3) | 157 (21.5) | .01 |
| Diabetes mellitus | 48 (5.84) | 2 (2.15) | 46 (6.31) | .11 |
| Hypertension | 125 (15.2) | 20 (21.7) | 105 (14.3) | .06 |
| Cardio/cerebrovascular disease | 20 (2.41) | 3 (3.23) | 17 (2.30) | .58 |
| Chronic respiratory disorder | 113 (13.6) | 10 (10.8) | 103 (14.0) | .40 |
| Autoimmune disease or immunosuppressant use | 40 (4.81) | 5 (5.38) | 35 (4.74) | .79 |
| HCW | 548 (65.9) | 78 (83.9) | 470 (63.7) | <.001 |
| Attending physician | 113 (13.6) | 8 (8.60) | 105 (14.2) | <.001 |
| Resident or fellow physician | 98 (11.8) | 8 (8.60) | 90 (12.2) | |
| Nurse | 225 (27.1) | 45 (48.4) | 180 (24.4) | |
| Other role | 112 (13.5) | 17 (18.3) | 95 (12.9) | |
| Work location | <.001 | |||
| Newark | 342 (41.2) | 54 (58.1) | 288 (39.0) | |
| New Brunswick/Piscataway | 489 (58.8) | 39 (41.9) | 450 (61.0) | |
| Exposure over the first month | ||||
| Worked on site, ever | 752 (90.8) | 86 (95.6) | 666 (90.2) | .10 |
| Stayed home as much as possible when not working | 502 (60.5) | 63 (68.5) | 439 (59.5) | .10 |
| Avoided others as much as possible when not at work | 514 (61.9) | 67 (72.0) | 447 (60.6) | .03 |
| Mask use outside the home | .51 | |||
| None | 510 (61.4) | 52 (55.9) | 458 (62.1) | |
| Sometimes | 225 (27.1) | 29 (31.2) | 196 (26.6) | |
| Always | 95 (11.4) | 12 (12.9) | 83 (11.3) | |
| Unprotected COVID-19 exposure at home | 112 (14.4) | 16 (42.1) | 96 (13.0) | <.001 |
| Unprotected COVID-19 exposure at work | 543 (67.0) | 66 (90.4) | 477 (64.6) | <.001 |
| Unprotected COVID-19 exposure outside home/work | 103 (13.3) | 12 (34.3) | 91 (12.3) | <.001 |
| Unprotected COVID-19 exposure at home or outside home/work | 188 (24.1) | 25 (61.0) | 163 (22.1) | <.001 |
| Average level of patient contact | <.001 | |||
| Non-HCW | 283 (34.2) | 15 (16.3) | 268 (36.4) | |
| Patient contact below median | 268 (32.4) | 60 (65.2) | 208 (28.3) | |
| Patient contact at or above median | 277 (33.5) | 17 (18.5) | 260 (35.3) | |
| HCWs only | ||||
| Worked in emergency department | 311 (38.9) | 43 (69.4) | 268 (36.3) | <.001 |
| Worked on medical floor | 246 (31.5) | 22 (50.0) | 224 (30.4) | .01 |
| Worked in operating room | 147 (18.8) | 24 (52.2) | 123 (16.7) | <.001 |
| Worked in intensive care unit | 262 (33.7) | 19 (47.5) | 243 (32.9) | .06 |
| Worked in designated COVID-19 unit | 242 (31.2) | 17 (44.7) | 225 (30.5) | .06 |
| Average % patients for whom used PPE per shift | .86 | |||
| <25% | 42 (7.79) | 6 (7.89) | 36 (7.78) | |
| 25%–49% | 48 (8.91) | 8 (10.5) | 40 (8.64) | |
| ≥50% | 449 (83.3) | 62 (81.6) | 387 (83.6) | |
| Average % time in PPE using N95 mask per shift | <.001 | |||
| <25% | 75 (14.0) | 22 (28.9) | 53 (11.5) | |
| 25%–49% | 51 (9.51) | 8 (10.5) | 43 (9.35) | |
| ≥50% | 410 (76.5) | 46 (60.5) | 364 (79.1) | |
| Average number of patients with COVID-19 per shift | .12 | |||
| 0 | 41 (8.17) | 10 (13.3) | 31 (7.26) | |
| 1–4 | 170 (33.9) | 20 (26.7) | 150 (35.1) | |
| ≥5 | 291 (58.0) | 45 (60.0) | 246 (57.6) |
Data are No. (%).
Abbreviations: COVID-19, coronavirus disease 2019; HCW, healthcare worker; PPE, personal protective equipment; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.
aPCR- or antibody-positive for SARS-CoV-2 were classified as positive.
b P values were computed using χ 2 or Fisher exact testing, as appropriate.
cHigh-risk zip code defined as having confirmed SARS-CoV-2 infections in > 2% of residents as of 20 August 2020.
dAsthma, chronic obstructive pulmonary disease, or other chronic lung disease.
eExcluding any values after diagnosis of SARS-CoV-2 infection.
fLowest reported value in the first month of participation.
Figure 1.Factors associated with SARS-CoV-2 infection. Forest plots show factors associated with infection in (A) Rutgers Corona Cohort participants (n = 831) and (B) the subset of healthcare workers (n = 548) as measured by positive SARS-CoV-2 PCR or antibody testing. Results reflect aORs from multivariable logistic regression models fitted with elastic net penalty for regularization and variable selection from among variables listed in Table 1. Reference groups included: age < 40 years (versus ≥ 60 years), white race (versus Asian race), and attending physician (vs nursing). Abbreviations: aOR, adjusted odds ratio; CI, confidence interval; ICU, intensive care unit; OR, operating room; PCR, polymerase chain reaction; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.
Figure 2.Average antibody levels over time among SARS-CoV-2–infected Rutgers Corona Cohort participants, stratified by symptom severity. Plots show estimated average levels of (A) total antibody and (B) IgG over time with 95% confidence intervals based on symptom severity. Curves and 95% confidence bands were estimated for different levels of symptom severity by fitting a model with a spline function for time and a random intercept to account for repeated measures. Abbreviations: Ig, immunoglobulin; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.
Figure 3.Factors associated with IgG titer among SARS-CoV-2–infected Rutgers Cohort participants (n = 81). Estimates reflect coefficients for factors in association with log-transformed IgG titer over time from a generalized additive mixed model, fitted with a spline for time. Factors reflect baseline values except disease severity (global assessment), cell counts (updated over time), and selected variables reflecting exposure in the first month of follow-up but excluding any values after SARS-CoV-2–positive testing (unprotected exposures to infected persons, worked on site). See “Methods” for details. Reference groups not shown are no symptoms, white race, and never smoker. Other chronic disease includes diabetes mellitus, cardio/cerebrovascular disease, cancer, chronic kidney disease, autoimmune disease, or immunosuppressant use. Chronic respiratory disease includes asthma, chronic obstructive pulmonary disease, or other chronic lung disease. Abbreviations: ALC, absolute lymphocyte count; ALT, alanine transaminase; ANC, absolute neutrophil count; CI, confidence interval; GFR, glomerular filtration rate; IgG, immunoglobulin G; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.
Figure 4.Duration of selected symptoms in infected RCC participants. Kaplan-Meier plots show prevalence and time course (in days) of 4 selected symptoms among infected RCC participants from infection to resolution: (A) fatigue; (B) loss of taste; (C) shortness of breath; and (D) neurologic changes besides altered taste or smell, eg, altered cognition or visual changes. Symptoms are shown in decreasing order of overall prevalence (A–D). Median, 75th, and 90th percentiles are indicated for each symptom among those who reported the symptom. Abbreviations: %ile, percentile; RCC, Rutgers Corona Cohort.
Figure 5.Average antibody levels over time among SARS-CoV-2–infected Rutgers Corona Cohort participants, stratified by symptom duration. Plots show estimated average levels of IgG over time with 95% confidence intervals based on symptom duration. Curves and 95% confidence bands were estimated for different durations of symptoms by fitting a model with a spline function for time and a random intercept to account for repeated measures. Abbreviations: IgG, immunoglobulin G; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.