Literature DB >> 34387077

Morlet Wavelet Filtering and Phase Analysis to Reduce the Limit of Detection for Thin Film Optical Biosensors.

Simon J Ward1, Rabeb Layouni2, Sofia Arshavsky-Graham3, Ester Segal3, Sharon M Weiss1.   

Abstract

The ultimate detection limit of optical biosensors is often limited by various noise sources, including those introduced by the optical measurement setup. While sophisticated modifications to instrumentation may reduce noise, a simpler approach that can benefit all sensor platforms is the application of signal processing to minimize the deleterious effects of noise. In this work, we show that applying complex Morlet wavelet convolution to Fabry-Pérot interference fringes characteristic of thin film reflectometric biosensors effectively filters out white noise and low-frequency reflectance variations. Subsequent calculation of the average difference in extracted phase between the filtered analyte and reference signals enables a significant reduction in the limit of detection (LOD). This method is applied on experimental data sets of thin film porous silicon sensors (PSi) in buffered solution and complex media obtained from two different laboratories. The demonstrated improvement in the LOD achieved using wavelet convolution and average phase difference paves the way for PSi optical biosensors to operate with clinically relevant detection limits for medical diagnostics, environmental monitoring, and food safety.

Entities:  

Keywords:  aptasensors; label free; limit of detection; porous silicon; signal processing; thin film; wavelet noise reduction

Mesh:

Substances:

Year:  2021        PMID: 34387077      PMCID: PMC8403169          DOI: 10.1021/acssensors.1c00787

Source DB:  PubMed          Journal:  ACS Sens        ISSN: 2379-3694            Impact factor:   9.618


  19 in total

1.  Integrated fluid handling system for biomolecular interaction analysis.

Authors:  S Sjölander; C Urbaniczky
Journal:  Anal Chem       Date:  1991-10-15       Impact factor: 6.986

2.  Fast wavelet transformation of EEG.

Authors:  S J Schiff; A Aldroubi; M Unser; S Sato
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1994-12

3.  Label-free optical biosensors based on aptamer-functionalized porous silicon scaffolds.

Authors:  Katharina Urmann; Johanna-Gabriela Walter; Thomas Scheper; Ester Segal
Journal:  Anal Chem       Date:  2015-01-15       Impact factor: 6.986

4.  Flow-Through Porous Silicon Membranes for Real-Time Label-Free Biosensing.

Authors:  Yiliang Zhao; Girija Gaur; Scott T Retterer; Paul E Laibinis; Sharon M Weiss
Journal:  Anal Chem       Date:  2016-10-27       Impact factor: 6.986

5.  Early detection of disease and scheduling of screening examinations.

Authors:  Sandra Lee; Hui Huang; Marvin Zelen
Journal:  Stat Methods Med Res       Date:  2004-12       Impact factor: 3.021

6.  Identification, characterization and application of a G-quadruplex structured DNA aptamer against cancer biomarker protein anterior gradient homolog 2.

Authors:  Jie Wu; Chi Wang; Xilan Li; Yanling Song; Wei Wang; Cong Li; Jia Hu; Zhi Zhu; Jiuxing Li; Weiyun Zhang; Zhongxian Lu; Chaoyong James Yang
Journal:  PLoS One       Date:  2012-09-28       Impact factor: 3.240

Review 7.  Surface plasmon resonance: a versatile technique for biosensor applications.

Authors:  Hoang Hiep Nguyen; Jeho Park; Sebyung Kang; Moonil Kim
Journal:  Sensors (Basel)       Date:  2015-05-05       Impact factor: 3.576

8.  Low-level toxicity of chemicals: No acceptable levels?

Authors:  Bruce P Lanphear
Journal:  PLoS Biol       Date:  2017-12-19       Impact factor: 8.029

Review 9.  Porous Silicon Optical Devices: Recent Advances in Biosensing Applications.

Authors:  Rosalba Moretta; Luca De Stefano; Monica Terracciano; Ilaria Rea
Journal:  Sensors (Basel)       Date:  2021-02-13       Impact factor: 3.576

10.  Mass Transfer Limitations of Porous Silicon-Based Biosensors for Protein Detection.

Authors:  Sofia Arshavsky Graham; Evgeniy Boyko; Rachel Salama; Ester Segal
Journal:  ACS Sens       Date:  2020-09-21       Impact factor: 7.711

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