Literature DB >> 34379526

Development of a Multiplex-PCR Serotyping Assay for Characterizing Legionella pneumophila Serogroups Based on the Diversity of Lipopolysaccharide Biosynthetic Loci.

Ryota Nakaue1, Tian Qin2, Masatomo Morita3, Hongyu Ren2, Bin Chang3, Miyo Murai1,4, Junko Amemura-Maekawa3, Makoto Ohnishi3.   

Abstract

Legionella pneumophila, which is the main cause of Legionnaires' disease, comprises at least 15 serogroups (SGs). We show here the diversity of lipopolysaccharide biosynthetic loci among serogroups and describe the development of a PCR serotyping assay for 15 SGs based on the sequences of LPS biosynthetic loci. Using this multiplex-PCR (M-PCR) system, serogroups were detected using primers that specifically amplify the sequences of SG1, SG2, SG5, SG7, SG8, SG9, SG11, SG13, SG3/15, and SG6/12. When PCR products of the expected sizes were not detected, we used primers that identified SG4/10/14. The PCR serotyping system specifically amplified the sequences corresponding to SGs of 238 L. pneumophila strains. This method will be very useful for conducting epidemiological studies and investigating outbreak of Legionnaires' disease.

Entities:  

Keywords:  Legionella pneumophila; serogroup

Mesh:

Substances:

Year:  2021        PMID: 34379526      PMCID: PMC8525581          DOI: 10.1128/JCM.00157-21

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  33 in total

1.  Development of a multiplex PCR assay targeting O-antigen modification genes for molecular serotyping of Shigella flexneri.

Authors:  Qiangzheng Sun; Ruiting Lan; Yiting Wang; Ailan Zhao; Shaomin Zhang; Jianping Wang; Yan Wang; Shengli Xia; Dong Jin; Zhigang Cui; Hongqing Zhao; Zhenjun Li; Changyun Ye; Shuxia Zhang; Huaiqi Jing; Jianguo Xu
Journal:  J Clin Microbiol       Date:  2011-08-31       Impact factor: 5.948

2.  Identification and functional characterization of an ABC transport system involved in polysaccharide export of A-band lipopolysaccharide in Pseudomonas aeruginosa.

Authors:  H L Rocchetta; J S Lam
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

3.  Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.

Authors:  Chen-Shan Chin; David H Alexander; Patrick Marks; Aaron A Klammer; James Drake; Cheryl Heiner; Alicia Clum; Alex Copeland; John Huddleston; Evan E Eichler; Stephen W Turner; Jonas Korlach
Journal:  Nat Methods       Date:  2013-05-05       Impact factor: 28.547

4.  Escherichia coli O-Genotyping PCR: a Comprehensive and Practical Platform for Molecular O Serogrouping.

Authors:  Atsushi Iguchi; Sunao Iyoda; Kazuko Seto; Tomoko Morita-Ishihara; Flemming Scheutz; Makoto Ohnishi
Journal:  J Clin Microbiol       Date:  2015-04-29       Impact factor: 5.948

5.  Antigenic lipopolysaccharide components of Legionella pneumophila recognized by monoclonal antibodies: possibilities and limitations for division of the species into serogroups.

Authors:  J H Helbig; J B Kurtz; M C Pastoris; C Pelaz; P C Lück
Journal:  J Clin Microbiol       Date:  1997-11       Impact factor: 5.948

6.  The C-terminal domain of the nucleotide-binding domain protein Wzt determines substrate specificity in the ATP-binding cassette transporter for the lipopolysaccharide O-antigens in Escherichia coli serotypes O8 and O9a.

Authors:  Leslie Cuthbertson; Jacqueline Powers; Chris Whitfield
Journal:  J Biol Chem       Date:  2005-06-24       Impact factor: 5.157

7.  A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster.

Authors:  Atsushi Iguchi; Sunao Iyoda; Taisei Kikuchi; Yoshitoshi Ogura; Keisuke Katsura; Makoto Ohnishi; Tetsuya Hayashi; Nicholas R Thomson
Journal:  DNA Res       Date:  2014-11-26       Impact factor: 4.458

8.  Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila.

Authors:  Sophia David; Leonor Sánchez-Busó; Simon R Harris; Pekka Marttinen; Christophe Rusniok; Carmen Buchrieser; Timothy G Harrison; Julian Parkhill
Journal:  PLoS Genet       Date:  2017-06-26       Impact factor: 5.917

9.  Updated Campylobacter jejuni Capsule PCR Multiplex Typing System and Its Application to Clinical Isolates from South and Southeast Asia.

Authors:  Frédéric Poly; Oralak Serichantalergs; Janelle Kuroiwa; Piyarat Pootong; Carl Mason; Patricia Guerry; Craig T Parker
Journal:  PLoS One       Date:  2015-12-02       Impact factor: 3.240

10.  DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.

Authors:  Yasuhiro Tanizawa; Takatomo Fujisawa; Yasukazu Nakamura
Journal:  Bioinformatics       Date:  2018-03-15       Impact factor: 6.937

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