Literature DB >> 34378793

Emerging roles of alternative cleavage and polyadenylation (APA) in human disease.

Prakash Dharmalingam1, Rajasekaran Mahalingam2, Hari Krishna Yalamanchili3,4,5, Tingting Weng6, Harry Karmouty-Quintana6, Ashrith Guha7, Rajarajan A Thandavarayan7.   

Abstract

In the messenger RNA (mRNA) maturation process, the 3'-end of pre-mRNA is cleaved and a poly(A) sequence is added, this is an important determinant of mRNA stability and its cellular functions. More than 60%-70% of human genes have three or more polyadenylation (APA) sites and can be cleaved at different sites, generating mRNA transcripts of varying lengths. This phenomenon is termed as alternative cleavage and polyadenylation (APA) and it plays role in key biological processes like gene regulation, cell proliferation, senescence, and also in various human diseases. Loss of regulatory microRNA binding sites and interactions with RNA-binding proteins leading to APA are largely investigated in human diseases. However, the functions of the core APA machinery and related factors during disease conditions remain largely unknown. In this review, we discuss the roles of polyadenylation machinery in relation to brain disease, cardiac failure, pulmonary fibrosis, cancer, infectious conditions, and other human diseases. Collectively, we believe this review will be a useful avenue for understanding the emerging role of APA in the pathobiology of various human diseases.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  3'-UTR; RNA binding proteins; RNA biology; alternative cleavage and polyadenylation; mRNA maturation; polyadenylation

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Year:  2021        PMID: 34378793     DOI: 10.1002/jcp.30549

Source DB:  PubMed          Journal:  J Cell Physiol        ISSN: 0021-9541            Impact factor:   6.384


  2 in total

1.  Cleavage stimulating factor 64 depletion mitigates cardiac fibrosis through alternative polyadenylation.

Authors:  Rahul Neupane; Keith Youker; Hari Krishna Yalamanchili; Katarzyna A Cieslik; Harry Karmouty-Quintana; Ashrith Guha; Rajarajan A Thandavarayan
Journal:  Biochem Biophys Res Commun       Date:  2022-01-29       Impact factor: 3.322

2.  Fip1 is a multivalent interaction scaffold for processing factors in human mRNA 3' end biogenesis.

Authors:  Lena Maria Muckenfuss; Anabel Carmen Migenda Herranz; Franziska Maria Boneberg; Marcello Clerici; Martin Jinek
Journal:  Elife       Date:  2022-09-08       Impact factor: 8.713

  2 in total

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