Literature DB >> 34376963

Distributed Weight Consolidation: A Brain Segmentation Case Study.

Patrick McClure1, Jakub R Kaczmarzyk2, Satrajit S Ghosh2, Peter Bandettini1, Charles Y Zheng1, John A Lee1, Dylan Nielson1, Francisco Pereira1.   

Abstract

Collecting the large datasets needed to train deep neural networks can be very difficult, particularly for the many applications for which sharing and pooling data is complicated by practical, ethical, or legal concerns. However, it may be the case that derivative datasets or predictive models developed within individual sites can be shared and combined with fewer restrictions. Training on distributed data and combining the resulting networks is often viewed as continual learning, but these methods require networks to be trained sequentially. In this paper, we introduce distributed weight consolidation (DWC), a continual learning method to consolidate the weights of separate neural networks, each trained on an independent dataset. We evaluated DWC with a brain segmentation case study, where we consolidated dilated convolutional neural networks trained on independent structural magnetic resonance imaging (sMRI) datasets from different sites. We found that DWC led to increased performance on test sets from the different sites, while maintaining generalization performance for a very large and completely independent multi-site dataset, compared to an ensemble baseline.

Entities:  

Year:  2018        PMID: 34376963      PMCID: PMC8351531     

Source DB:  PubMed          Journal:  Adv Neural Inf Process Syst        ISSN: 1049-5258


  11 in total

1.  Toward discovery science of human brain function.

Authors:  Bharat B Biswal; Maarten Mennes; Xi-Nian Zuo; Suril Gohel; Clare Kelly; Steve M Smith; Christian F Beckmann; Jonathan S Adelstein; Randy L Buckner; Stan Colcombe; Anne-Marie Dogonowski; Monique Ernst; Damien Fair; Michelle Hampson; Matthew J Hoptman; James S Hyde; Vesa J Kiviniemi; Rolf Kötter; Shi-Jiang Li; Ching-Po Lin; Mark J Lowe; Clare Mackay; David J Madden; Kristoffer H Madsen; Daniel S Margulies; Helen S Mayberg; Katie McMahon; Christopher S Monk; Stewart H Mostofsky; Bonnie J Nagel; James J Pekar; Scott J Peltier; Steven E Petersen; Valentin Riedl; Serge A R B Rombouts; Bart Rypma; Bradley L Schlaggar; Sein Schmidt; Rachael D Seidler; Greg J Siegle; Christian Sorg; Gao-Jun Teng; Juha Veijola; Arno Villringer; Martin Walter; Lihong Wang; Xu-Chu Weng; Susan Whitfield-Gabrieli; Peter Williamson; Christian Windischberger; Yu-Feng Zang; Hong-Ying Zhang; F Xavier Castellanos; Michael P Milham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

2.  Overcoming catastrophic forgetting in neural networks.

Authors:  James Kirkpatrick; Razvan Pascanu; Neil Rabinowitz; Joel Veness; Guillaume Desjardins; Andrei A Rusu; Kieran Milan; John Quan; Tiago Ramalho; Agnieszka Grabska-Barwinska; Demis Hassabis; Claudia Clopath; Dharshan Kumaran; Raia Hadsell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

Review 3.  FreeSurfer.

Authors:  Bruce Fischl
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

Review 4.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

5.  Continual Learning Through Synaptic Intelligence.

Authors:  Friedemann Zenke; Ben Poole; Surya Ganguli
Journal:  Proc Mach Learn Res       Date:  2017

6.  The NKI-Rockland Sample: A Model for Accelerating the Pace of Discovery Science in Psychiatry.

Authors:  Kate Brody Nooner; Stanley J Colcombe; Russell H Tobe; Maarten Mennes; Melissa M Benedict; Alexis L Moreno; Laura J Panek; Shaquanna Brown; Stephen T Zavitz; Qingyang Li; Sharad Sikka; David Gutman; Saroja Bangaru; Rochelle Tziona Schlachter; Stephanie M Kamiel; Ayesha R Anwar; Caitlin M Hinz; Michelle S Kaplan; Anna B Rachlin; Samantha Adelsberg; Brian Cheung; Ranjit Khanuja; Chaogan Yan; Cameron C Craddock; Vincent Calhoun; William Courtney; Margaret King; Dylan Wood; Christine L Cox; A M Clare Kelly; Adriana Di Martino; Eva Petkova; Philip T Reiss; Nancy Duan; Dawn Thomsen; Bharat Biswal; Barbara Coffey; Matthew J Hoptman; Daniel C Javitt; Nunzio Pomara; John J Sidtis; Harold S Koplewicz; Francisco Xavier Castellanos; Bennett L Leventhal; Michael P Milham
Journal:  Front Neurosci       Date:  2012-10-16       Impact factor: 4.677

7.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

8.  COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging Data.

Authors:  Sergey M Plis; Anand D Sarwate; Dylan Wood; Christopher Dieringer; Drew Landis; Cory Reed; Sandeep R Panta; Jessica A Turner; Jody M Shoemaker; Kim W Carter; Paul Thompson; Kent Hutchison; Vince D Calhoun
Journal:  Front Neurosci       Date:  2016-08-19       Impact factor: 4.677

9.  Temporal interpolation alters motion in fMRI scans: Magnitudes and consequences for artifact detection.

Authors:  Jonathan D Power; Mark Plitt; Prantik Kundu; Peter A Bandettini; Alex Martin
Journal:  PLoS One       Date:  2017-09-07       Impact factor: 3.240

10.  Distributed deep learning networks among institutions for medical imaging.

Authors:  Ken Chang; Niranjan Balachandar; Carson Lam; Darvin Yi; James Brown; Andrew Beers; Bruce Rosen; Daniel L Rubin; Jayashree Kalpathy-Cramer
Journal:  J Am Med Inform Assoc       Date:  2018-08-01       Impact factor: 7.942

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  2 in total

1.  A Federated Mining Approach on Predicting Diabetes-Related Complications: Demonstration Using Real-World Clinical Data.

Authors:  Humayera Islam; Abu Mosa
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

2.  Secure deep learning for distributed data against maliciouscentral server.

Authors:  Le Trieu Phong
Journal:  PLoS One       Date:  2022-08-01       Impact factor: 3.752

  2 in total

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