Literature DB >> 34375094

Controlling Amphiphilic Polymer Folding beyond the Primary Structure with Protein-Mimetic Di(Phenylalanine).

Jacqueline L Warren1, Peter A Dykeman-Bermingham1, Abigail S Knight1.   

Abstract

While methods for polymer synthesis have proliferated, their functionality pales in comparison to natural biopolymers-strategies are limited for building the intricate network of noncovalent interactions necessary to elicit complex, protein-like functions. Using a bioinspired di(phenylalanine) acrylamide (FF) monomer, we explored the impact of various noncovalent interactions in generating ordered assembled structures. Amphiphilic copolymers were synthesized that exhibit β-sheet-like local structure upon collapsing into single-chain assemblies in aqueous environments. Systematic analysis of a series of amphiphilic copolymers illustrated that the global collapse is primarily driven by hydrophobic forces. Hydrogen-bonding and aromatic interactions stabilize local structure, as β-sheet-like interactions were identified via circular dichroism and thioflavin T fluorescence. Similar analysis of phenylalanine (F) and alanine-phenylalanine acrylamide (AF) copolymers found that distancing the aromatic residue from the polymer backbone is sufficient to induce β-sheet-like local structure akin to the FF copolymers; however, the interactions between AF subunits are less stable than those formed by FF. Further, hydrogen-bond donating hydrophilic monomers disrupt internal structure formed by FF within collapsed assemblies. Collectively, these results illuminate design principles for the facile incorporation of multiple facets of protein-mimetic, higher-order structure within folded synthetic polymers.

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Year:  2021        PMID: 34375094      PMCID: PMC9362848          DOI: 10.1021/jacs.1c05659

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   16.383


  29 in total

1.  Using circular dichroism collected as a function of temperature to determine the thermodynamics of protein unfolding and binding interactions.

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Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

2.  Hydrogen bonds with pi-acceptors in proteins: frequencies and role in stabilizing local 3D structures.

Authors:  T Steiner; G Koellner
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

3.  Self-Assembled Multi- and Single-Chain Glyconanoparticles and Their Lectin Recognition.

Authors:  Yamin Abdouni; Gijs M Ter Huurne; Gokhan Yilmaz; Alessandra Monaco; Carlos Redondo-Gómez; E W Meijer; Anja R A Palmans; C Remzi Becer
Journal:  Biomacromolecules       Date:  2020-12-29       Impact factor: 6.988

4.  Investigation of aromatic-backbone amide interactions in the model peptide acetyl-Phe-Gly-Gly-N-methyl amide using molecular dynamics simulations and protein database search.

Authors:  G Tóth; R F Murphy; S Lovas
Journal:  J Am Chem Soc       Date:  2001-11-28       Impact factor: 15.419

5.  Polymeric "Clickase" Accelerates the Copper Click Reaction of Small Molecules, Proteins, and Cells.

Authors:  Junfeng Chen; Jiang Wang; Ke Li; Yuhan Wang; Martin Gruebele; Andrew L Ferguson; Steven C Zimmerman
Journal:  J Am Chem Soc       Date:  2019-06-04       Impact factor: 15.419

6.  Probing the role of aromaticity in the design of dipeptide based nanostructures.

Authors:  Aseem Mishra; Virander Singh Chauhan
Journal:  Nanoscale       Date:  2011-01-11       Impact factor: 7.790

7.  Single-chain folding of polymers for catalytic systems in water.

Authors:  Takaya Terashima; Tristan Mes; Tom F A De Greef; Martijn A J Gillissen; Pol Besenius; Anja R A Palmans; E W Meijer
Journal:  J Am Chem Soc       Date:  2011-03-15       Impact factor: 15.419

8.  Self-Assembly of PEGylated Diphenylalanines into Photoluminescent Fibrillary Aggregates.

Authors:  Carlo Diaferia; Valentina Roviello; Giancarlo Morelli; Antonella Accardo
Journal:  Chemphyschem       Date:  2019-10-18       Impact factor: 3.102

9.  Nanovesicles based on self-assembly of conformationally constrained aromatic residue containing amphiphilic dipeptides.

Authors:  Aseem Mishra; Jiban Jyoti Panda; Atanu Basu; Virander Singh Chauhan
Journal:  Langmuir       Date:  2008-03-22       Impact factor: 3.882

10.  Circular Dichroism of Amino Acids: Following the Structural Formation of Phenylalanine.

Authors:  Nadav Amdursky; Molly M Stevens
Journal:  Chemphyschem       Date:  2015-08-10       Impact factor: 3.102

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