Literature DB >> 34373530

Validating deep learning inference during chest X-ray classification for COVID-19 screening.

Robbie Sadre1, Baskaran Sundaram2, Sharmila Majumdar3, Daniela Ushizima4,5,6.   

Abstract

The new coronavirus unleashed a worldwide pandemic in early 2020, and a fatality rate several times that of the flu. As the number of infections soared, and capabilities for testing lagged behind, chest X-ray (CXR) imaging became more relevant in the early diagnosis and treatment planning for patients with suspected or confirmed COVID-19 infection. In a few weeks, proposed new methods for lung screening using deep learning rapidly appeared, while quality assurance discussions lagged behind. This paper proposes a set of protocols to validate deep learning algorithms, including our ROI Hide-and-Seek protocol, which emphasizes or hides key regions of interest from CXR data. Our protocol allows assessing the classification performance for anomaly detection and its correlation to radiological signatures, an important issue overlooked in several deep learning approaches proposed so far. By running a set of systematic tests over CXR representations using public image datasets, we demonstrate the weaknesses of current techniques and offer perspectives on the advantages and limitations of automated radiography analysis when using heterogeneous data sources.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34373530     DOI: 10.1038/s41598-021-95561-y

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  11 in total

1.  Endolymphatic-mastoid shunt operation: results of the 24 cases and revision surgery with the silastic sheet.

Authors:  K Gyo; N Yanagihara
Journal:  Auris Nasus Larynx       Date:  1982       Impact factor: 1.863

2.  Assessing risk factors for SARS-CoV-2 infection in patients presenting with symptoms in Shanghai, China: a multicentre, observational cohort study.

Authors:  Bei Mao; Yang Liu; Yan-Hua Chai; Xiao-Yan Jin; Hai-Wen Lu; Jia-Wei Yang; Xi-Wen Gao; Xiao-Lian Song; Hong Bao; An Wang; Wen-Chao Gu; Lei Zhao; Jie-Ping Pan; Fan Li; Tie-Feng Zhang; Ye-Chang Qian; Chun-Ling Du; Wei Ding; Chun-Lin Tu; De-Jie Chu; Chun Li; Ling Ye; Yong Luo; Cui-Xia Zheng; Rong-Huan Yu; Zhong-Min Qiu; Hui-Fang Cao; Jia-Wei Ren; Jing-Ya Zhao; Chang-Hui Wang; Hong-Zhou Lu; Jun Li; Yang Hu; Shuo Liang; Zhi-Jun Jie; Jie-Ming Qu; Jin-Fu Xu
Journal:  Lancet Digit Health       Date:  2020-05-14

3.  Kidney involvement in COVID-19 and rationale for extracorporeal therapies.

Authors:  Claudio Ronco; Thiago Reis
Journal:  Nat Rev Nephrol       Date:  2020-06       Impact factor: 28.314

4.  Radiological Society of North America Expert Consensus Document on Reporting Chest CT Findings Related to COVID-19: Endorsed by the Society of Thoracic Radiology, the American College of Radiology, and RSNA.

Authors:  Scott Simpson; Fernando U Kay; Suhny Abbara; Sanjeev Bhalla; Jonathan H Chung; Michael Chung; Travis S Henry; Jeffrey P Kanne; Seth Kligerman; Jane P Ko; Harold Litt
Journal:  Radiol Cardiothorac Imaging       Date:  2020-03-25

5.  COVIDiagnosis-Net: Deep Bayes-SqueezeNet based diagnosis of the coronavirus disease 2019 (COVID-19) from X-ray images.

Authors:  Ferhat Ucar; Deniz Korkmaz
Journal:  Med Hypotheses       Date:  2020-04-23       Impact factor: 1.538

6.  Tracking COVID-19 using taste and smell loss Google searches is not a reliable strategy.

Authors:  Kim Asseo; Fabrizio Fierro; Yuli Slavutsky; Johannes Frasnelli; Masha Y Niv
Journal:  Sci Rep       Date:  2020-11-25       Impact factor: 4.379

7.  RANDGAN: Randomized generative adversarial network for detection of COVID-19 in chest X-ray.

Authors:  Saman Motamed; Patrik Rogalla; Farzad Khalvati
Journal:  Sci Rep       Date:  2021-04-21       Impact factor: 4.379

8.  A role for CT in COVID-19? What data really tell us so far.

Authors:  Michael D Hope; Constantine A Raptis; Amar Shah; Mark M Hammer; Travis S Henry
Journal:  Lancet       Date:  2020-03-27       Impact factor: 79.321

9.  COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images.

Authors:  Linda Wang; Zhong Qiu Lin; Alexander Wong
Journal:  Sci Rep       Date:  2020-11-11       Impact factor: 4.379

10.  Deep learning-based triage and analysis of lesion burden for COVID-19: a retrospective study with external validation.

Authors:  Minghuan Wang; Chen Xia; Lu Huang; Shabei Xu; Chuan Qin; Jun Liu; Ying Cao; Pengxin Yu; Tingting Zhu; Hui Zhu; Chaonan Wu; Rongguo Zhang; Xiangyu Chen; Jianming Wang; Guang Du; Chen Zhang; Shaokang Wang; Kuan Chen; Zheng Liu; Liming Xia; Wei Wang
Journal:  Lancet Digit Health       Date:  2020-09-22
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  5 in total

Review 1.  Telemedicine and virtual respiratory care in the era of COVID-19.

Authors:  Hilary Pinnock; Phyllis Murphie; Ioannis Vogiatzis; Vitalii Poberezhets
Journal:  ERJ Open Res       Date:  2022-07-25

Review 2.  Machine learning applications for COVID-19 outbreak management.

Authors:  Arash Heidari; Nima Jafari Navimipour; Mehmet Unal; Shiva Toumaj
Journal:  Neural Comput Appl       Date:  2022-06-10       Impact factor: 5.102

3.  Audio texture analysis of COVID-19 cough, breath, and speech sounds.

Authors:  Garima Sharma; Karthikeyan Umapathy; Sri Krishnan
Journal:  Biomed Signal Process Control       Date:  2022-04-18       Impact factor: 3.880

4.  Deep fusion of gray level co-occurrence matrices for lung nodule classification.

Authors:  Ahmed Saihood; Hossein Karshenas; Ahmad Reza Naghsh Nilchi
Journal:  PLoS One       Date:  2022-09-29       Impact factor: 3.752

5.  CGENet: A Deep Graph Model for COVID-19 Detection Based on Chest CT.

Authors:  Si-Yuan Lu; Zheng Zhang; Yu-Dong Zhang; Shui-Hua Wang
Journal:  Biology (Basel)       Date:  2021-12-27
  5 in total

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