Literature DB >> 34362911

Responsive core-shell DNA particles trigger lipid-membrane disruption and bacteria entrapment.

Michal Walczak1, Ryan A Brady2, Leonardo Mancini1, Claudia Contini3,4, Roger Rubio-Sánchez1, William T Kaufhold1,3, Pietro Cicuta1, Lorenzo Di Michele5,6,7.   

Abstract

Biology has evolved a variety of agents capable of permeabilizing and disrupting lipid membranes, from amyloid aggregates, to antimicrobial peptides, to venom compounds. While often associated with disease or toxicity, these agents are also central to many biosensing and therapeutic technologies. Here, we introduce a class of synthetic, DNA-based particles capable of disrupting lipid membranes. The particles have finely programmable size, and self-assemble from all-DNA and cholesterol-DNA nanostructures, the latter forming a membrane-adhesive core and the former a protective hydrophilic corona. We show that the corona can be selectively displaced with a molecular cue, exposing the 'sticky' core. Unprotected particles adhere to synthetic lipid vesicles, which in turn enhances membrane permeability and leads to vesicle collapse. Furthermore, particle-particle coalescence leads to the formation of gel-like DNA aggregates that envelop surviving vesicles. This response is reminiscent of pathogen immobilisation through immune cells secretion of DNA networks, as we demonstrate by trapping E. coli bacteria.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34362911     DOI: 10.1038/s41467-021-24989-7

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  52 in total

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Authors:  Matteo Dal Peraro; F Gisou van der Goot
Journal:  Nat Rev Microbiol       Date:  2015-12-07       Impact factor: 60.633

Review 2.  The multiple faces of caveolae.

Authors:  Robert G Parton; Kai Simons
Journal:  Nat Rev Mol Cell Biol       Date:  2007-03       Impact factor: 94.444

Review 3.  The nuclear pore complex: understanding its function through structural insight.

Authors:  Martin Beck; Ed Hurt
Journal:  Nat Rev Mol Cell Biol       Date:  2016-12-21       Impact factor: 94.444

Review 4.  Cellular Functions and Molecular Mechanisms of the ESCRT Membrane-Scission Machinery.

Authors:  Liliane Christ; Camilla Raiborg; Eva M Wenzel; Coen Campsteijn; Harald Stenmark
Journal:  Trends Biochem Sci       Date:  2016-09-23       Impact factor: 13.807

Review 5.  Mechanisms of clathrin-mediated endocytosis.

Authors:  Marko Kaksonen; Aurélien Roux
Journal:  Nat Rev Mol Cell Biol       Date:  2018-02-07       Impact factor: 94.444

6.  Hepatitis C virus entry requires a critical postinternalization step and delivery to early endosomes via clathrin-coated vesicles.

Authors:  Laurent Meertens; Claire Bertaux; Tatjana Dragic
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

Review 7.  Regulation of transbilayer plasma membrane phospholipid asymmetry.

Authors:  David L Daleke
Journal:  J Lipid Res       Date:  2002-12-16       Impact factor: 5.922

Review 8.  Phospholipase A2 structure/function, mechanism, and signaling.

Authors:  John E Burke; Edward A Dennis
Journal:  J Lipid Res       Date:  2008-11-14       Impact factor: 5.922

9.  Characterization of rotavirus cell entry.

Authors:  Claudia Sánchez-San Martín; Tomás López; Carlos F Arias; Susana López
Journal:  J Virol       Date:  2004-03       Impact factor: 5.103

Review 10.  The BAR domain proteins: molding membranes in fission, fusion, and phagy.

Authors:  Gang Ren; Parimala Vajjhala; Janet S Lee; Barbara Winsor; Alan L Munn
Journal:  Microbiol Mol Biol Rev       Date:  2006-03       Impact factor: 11.056

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  6 in total

Review 1.  Digging into the biophysical features of cell membranes with lipid-DNA conjugates.

Authors:  Ahsan Ausaf Ali; Yousef Bagheri; Mingxu You
Journal:  Q Rev Biophys       Date:  2022-05-16       Impact factor: 7.440

2.  Signal-processing and adaptive prototissue formation in metabolic DNA protocells.

Authors:  Avik Samanta; Maximilian Hörner; Wei Liu; Wilfried Weber; Andreas Walther
Journal:  Nat Commun       Date:  2022-07-08       Impact factor: 17.694

Review 3.  Amphiphilic DNA nanostructures for bottom-up synthetic biology.

Authors:  Roger Rubio-Sánchez; Giacomo Fabrini; Pietro Cicuta; Lorenzo Di Michele
Journal:  Chem Commun (Camb)       Date:  2021-11-30       Impact factor: 6.222

4.  Self assembling cluster crystals from DNA based dendritic nanostructures.

Authors:  Emmanuel Stiakakis; Niklas Jung; Nataša Adžić; Taras Balandin; Emmanuel Kentzinger; Ulrich Rücker; Ralf Biehl; Jan K G Dhont; Ulrich Jonas; Christos N Likos
Journal:  Nat Commun       Date:  2021-12-09       Impact factor: 14.919

5.  Tetraphenylethylene-DNA conjugates: influence of sticky ends and DNA sequence length on the supramolecular assembly of AIE-active vesicles.

Authors:  Simon Rothenbühler; Adrian Gonzalez; Ioan Iacovache; Simon M Langenegger; Benoît Zuber; Robert Häner
Journal:  Org Biomol Chem       Date:  2022-05-11       Impact factor: 3.890

6.  Reaction-Diffusion Patterning of DNA-Based Artificial Cells.

Authors:  Adrian Leathers; Michal Walczak; Ryan A Brady; Assala Al Samad; Jurij Kotar; Michael J Booth; Pietro Cicuta; Lorenzo Di Michele
Journal:  J Am Chem Soc       Date:  2022-09-14       Impact factor: 16.383

  6 in total

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