Literature DB >> 34360636

DNA Dynamics under Periodic Force Effects.

Alexander Svidlov1,2, Mikhail Drobotenko1, Alexander Basov1,3, Eugeny Gerasimenko4, Vadim Malyshko2,3, Anna Elkina1,2, Mikhail Baryshev1,2,4, Stepan Dzhimak1,2.   

Abstract

The sensitivity of DNA to electromagnetic radiation in different ranges differs depending on various factors. The aim of this study was to examine the molecular dynamics of DNA under the influence of external periodic influences with different frequencies. In the present paper, within the framework of a mechanical model without simplifications, we investigated the effect of various frequencies of external periodic action in the range from 1011 s-1 to 108 s-1 on the dynamics of a DNA molecule. It was shown that under the influence of an external periodic force, a DNA molecule can perform oscillatory movements with a specific frequency characteristic of this molecule, which differs from the frequency of the external influence ω. It was found that the frequency of such specific vibrations of a DNA molecule depends on the sequence of nucleotides. Using the developed mathematical model describing the rotational motion of the nitrogenous bases around the sugar-phosphate chain, it is possible to calculate the frequency and amplitude of the oscillations of an individual DNA area. Such calculations can find application in the field of molecular nanotechnology.

Entities:  

Keywords:  DNA; dynamics of a double-stranded DNA molecule; mathematical model; open states; rotational movements of nitrogenous bases

Year:  2021        PMID: 34360636     DOI: 10.3390/ijms22157873

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  3 in total

1.  Biophysical Study of the Structure, Dynamics, and Function of Nucleic Acids.

Authors:  Joon-Hwa Lee; Masato Katahira
Journal:  Int J Mol Sci       Date:  2022-05-23       Impact factor: 6.208

2.  Gas-Transport Characteristics of PdCu-Nb-PdCu Membranes Modified with Nanostructured Palladium Coating.

Authors:  Iliya Petriev; Polina Pushankina; Nikita Shostak; Mikhail Baryshev
Journal:  Int J Mol Sci       Date:  2021-12-25       Impact factor: 5.923

3.  Genesis of Open States Zones in a DNA Molecule Depends on the Localization and Value of the Torque.

Authors:  Stepan Dzhimak; Alexandr Svidlov; Anna Elkina; Eugeny Gerasimenko; Mikhail Baryshev; Mikhail Drobotenko
Journal:  Int J Mol Sci       Date:  2022-04-17       Impact factor: 6.208

  3 in total

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