Literature DB >> 34359285

Liquid Biopsy Is a Promising Tool for Genetic Testing in Idiopathic Pulmonary Fibrosis.

Pierlorenzo Pallante1, Umberto Malapelle2, Mariantonia Nacchio2, Roberta Sgariglia2, Domenico Galati3, Ludovica Capitelli4, Serena Zanotta3, Mario Galgani5, Erica Piemonte5, Alessandro Sanduzzi Zamparelli4, Gaetano Rea6, Marialuisa Bocchino4.   

Abstract

Liquid biopsy, which allows the isolation of circulating cell-free (ccf) DNA from blood, is an emerging noninvasive tool widely used in oncology for diagnostic and prognosis purposes. Previous data have shown that serum cfDNA discriminates idiopathic pulmonary fibrosis (IPF) from other interstitial lung diseases. Our study aimed to measure plasma levels of ccfDNA in 59 consecutive therapy-naive and clinically stable IPF patients. The single nucleotide polymorphism (SNP) of the MUC5B gene promoter (rs35705950), associated with increased susceptibility of developing IPF, has been sought in plasma cfDNA and genomic DNA for comparison. Thirty-five age- and sex-matched healthy volunteers were recruited as the control group. Our results show that concentrations of small-size ccfDNA fragments were significantly higher in IPF patients than in controls and inversely correlated with lung function deterioration. Moreover, the median level of 104 ng/mL allowed discriminating patients with mild disease from those more advanced. The rs35705950 polymorphism was found in 11.8% of IPF patients and 8% of controls, with no differences. Complete concordance between ccfDNA and genomic DNA was detected in all control samples, while four out of seven IPF cases (57%) carrying the rs35705950 polymorphism were discordant from genomic DNA (7% of total IPF). Liquid biopsy is a suitable tool with optimistic expectations of application in the field of IPF. In analogy with cancer biology, finding some discrepancies between ccfDNA and genomic DNA in IPF patients suggests that the former may convey specific genetic information present in the primary site of the disease.

Entities:  

Keywords:  MUC5B; cell-free DNA; genetics; idiopathic pulmonary fibrosis; liquid biopsy

Year:  2021        PMID: 34359285     DOI: 10.3390/diagnostics11071202

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  2 in total

Review 1.  The oncogenic landscape of the idiopathic pulmonary fibrosis: a narrative review.

Authors:  Giulia Maria Stella; Vito D'Agnano; Davide Piloni; Laura Saracino; Sara Lettieri; Francesca Mariani; Andrea Lancia; Chandra Bortolotto; Pietro Rinaldi; Francesco Falanga; Cristiano Primiceri; Angelo Guido Corsico; Andrea Bianco
Journal:  Transl Lung Cancer Res       Date:  2022-03

Review 2.  Molecular Mechanisms and Cellular Contribution from Lung Fibrosis to Lung Cancer Development.

Authors:  Anna Valeria Samarelli; Valentina Masciale; Beatrice Aramini; Georgina Pamela Coló; Roberto Tonelli; Alessandro Marchioni; Giulia Bruzzi; Filippo Gozzi; Dario Andrisani; Ivana Castaniere; Linda Manicardi; Antonio Moretti; Luca Tabbì; Giorgia Guaitoli; Stefania Cerri; Massimo Dominici; Enrico Clini
Journal:  Int J Mol Sci       Date:  2021-11-10       Impact factor: 5.923

  2 in total

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