Literature DB >> 34356635

Introduction to Single-Cell DNA Methylation Profiling Methods.

Jongseong Ahn1, Sunghoon Heo1, Jihyun Lee2,3, Duhee Bang1.   

Abstract

DNA methylation is an epigenetic mechanism that is related to mammalian cellular differentiation, gene expression regulation, and disease. In several studies, DNA methylation has been identified as an effective marker to identify differences between cells. In this review, we introduce single-cell DNA-methylation profiling methods, including experimental strategies and approaches to computational data analysis. Furthermore, the blind spots of the basic analysis and recent alternatives are briefly described. In addition, we introduce well-known applications and discuss future development.

Entities:  

Keywords:  DNA methylation; bioinformatics; single cell

Year:  2021        PMID: 34356635     DOI: 10.3390/biom11071013

Source DB:  PubMed          Journal:  Biomolecules        ISSN: 2218-273X


  7 in total

Review 1.  Single-cell sequencing: A cutting edge tool in molecular medical research.

Authors:  Pratibha Misra; Amruta R Jadhav; Sharmila A Bapat
Journal:  Med J Armed Forces India       Date:  2022-08-26

Review 2.  Plant DNA Methylation Responds to Nutrient Stress.

Authors:  Xiaoru Fan; Lirun Peng; Yong Zhang
Journal:  Genes (Basel)       Date:  2022-05-31       Impact factor: 4.141

3.  First Steps towards the Development of Epigenetic Biomarkers in Female Cheetahs (Acinonyx jubatus).

Authors:  Alexandra Weyrich; Tania P Guerrero-Altamirano; Selma Yasar; Gábor Á Czirják; Bettina Wachter; Jörns Fickel
Journal:  Life (Basel)       Date:  2022-06-20

Review 4.  The Role of Epigenetic Modifications in Late Complications in Type 1 Diabetes.

Authors:  Barbara Čugalj Kern; Katarina Trebušak Podkrajšek; Jernej Kovač; Robert Šket; Barbara Jenko Bizjan; Tine Tesovnik; Maruša Debeljak; Tadej Battelino; Nataša Bratina
Journal:  Genes (Basel)       Date:  2022-04-15       Impact factor: 4.141

5.  Decoding the sorghum methylome: understanding epigenetic contributions to agronomic traits.

Authors:  Ulduz Vafadarshamasbi; Emma Mace; David Jordan; Peter A Crisp
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

6.  An Association Study of DNA Methylation and Gene Expression in Angelman Syndrome: A Bioinformatics Approach.

Authors:  Julia Panov; Hanoch Kaphzan
Journal:  Int J Mol Sci       Date:  2022-08-15       Impact factor: 6.208

Review 7.  Applications of Single-Cell Sequencing Technology to the Enteric Nervous System.

Authors:  Richard A Guyer; Jessica L Mueller; Allan M Goldstein
Journal:  Biomolecules       Date:  2022-03-15
  7 in total

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