Literature DB >> 34354795

RECONSTRUCTION AND SEGMENTATION OF PARALLEL MR DATA USING IMAGE DOMAIN DEEP-SLR.

Aniket Pramanik1, Mathews Jacob1.   

Abstract

The main focus of this work is a novel framework for the joint reconstruction and segmentation of parallel MRI (PMRI) brain data. We introduce an image domain deep network for calibrationless recovery of undersampled PMRI data. The proposed approach is the deep-learning (DL) based generalization of local low-rank based approaches for uncalibrated PMRI recovery including CLEAR [6]. Since the image domain approach exploits additional annihilation relations compared to k-space based approaches, we expect it to offer improved performance. To minimize segmentation errors resulting from undersampling artifacts, we combined the proposed scheme with a segmentation network and trained it in an end-to-end fashion. In addition to reducing segmentation errors, this approach also offers improved reconstruction performance by reducing overfitting; the reconstructed images exhibit reduced blurring and sharper edges than independently trained reconstruction network.

Entities:  

Keywords:  CNN; Parallel MRI; calibrationless

Year:  2021        PMID: 34354795      PMCID: PMC8330410          DOI: 10.1109/isbi48211.2021.9434056

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  6 in total

1.  SENSE: sensitivity encoding for fast MRI.

Authors:  K P Pruessmann; M Weiger; M B Scheidegger; P Boesiger
Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

2.  Generalized autocalibrating partially parallel acquisitions (GRAPPA).

Authors:  Mark A Griswold; Peter M Jakob; Robin M Heidemann; Mathias Nittka; Vladimir Jellus; Jianmin Wang; Berthold Kiefer; Axel Haase
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

Review 3.  An open, multi-vendor, multi-field-strength brain MR dataset and analysis of publicly available skull stripping methods agreement.

Authors:  Roberto Souza; Oeslle Lucena; Julia Garrafa; David Gobbi; Marina Saluzzi; Simone Appenzeller; Letícia Rittner; Richard Frayne; Roberto Lotufo
Journal:  Neuroimage       Date:  2017-08-12       Impact factor: 6.556

4.  MoDL: Model-Based Deep Learning Architecture for Inverse Problems.

Authors:  Hemant K Aggarwal; Merry P Mani; Mathews Jacob
Journal:  IEEE Trans Med Imaging       Date:  2018-08-13       Impact factor: 10.048

5.  Deep Generalization of Structured Low-Rank Algorithms (Deep-SLR).

Authors:  Aniket Pramanik; Hemant Kumar Aggarwal; Mathews Jacob
Journal:  IEEE Trans Med Imaging       Date:  2020-11-30       Impact factor: 10.048

6.  ESPIRiT--an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA.

Authors:  Martin Uecker; Peng Lai; Mark J Murphy; Patrick Virtue; Michael Elad; John M Pauly; Shreyas S Vasanawala; Michael Lustig
Journal:  Magn Reson Med       Date:  2014-03       Impact factor: 4.668

  6 in total

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