Literature DB >> 34341490

Identification of HSC/MPP expansion units in fetal liver by single-cell spatiotemporal transcriptomics.

Suwei Gao1,2,3, Qiang Shi4, Yifan Zhang1,2,3, Guixian Liang1,2,3, Zhixin Kang1,2,3, Baofeng Huang1,2,3, Dongyuan Ma1,2, Lu Wang5, Jianwei Jiao2,3,6, Xiangdong Fang2,3,7,8, Cheng-Ran Xu9,10, Longqi Liu11,12, Xun Xu11,13, Berthold Göttgens14, Cheng Li15, Feng Liu16,17,18.   

Abstract

Limited knowledge of cellular and molecular mechanisms underlying hematopoietic stem cell and multipotent progenitor (HSC/MPP) expansion within their native niche has impeded the application of stem cell-based therapies for hematological malignancies. Here, we constructed a spatiotemporal transcriptome map of mouse fetal liver (FL) as a platform for hypothesis generation and subsequent experimental validation of novel regulatory mechanisms. Single-cell transcriptomics revealed three transcriptionally heterogeneous HSC/MPP subsets, among which a CD93-enriched subset exhibited enhanced stem cell properties. Moreover, by employing integrative analysis of single-cell and spatial transcriptomics, we identified novel HSC/MPP 'pocket-like' units (HSC PLUS), composed of niche cells (hepatoblasts, stromal cells, endothelial cells, and macrophages) and enriched with growth factors. Unexpectedly, macrophages showed an 11-fold enrichment in the HSC PLUS. Functionally, macrophage-HSC/MPP co-culture assay and candidate molecule testing, respectively, validated the supportive role of macrophages and growth factors (MDK, PTN, and IGFBP5) in HSC/MPP expansion. Finally, cross-species analysis and functional validation showed conserved cell-cell interactions and expansion mechanisms but divergent transcriptome signatures between mouse and human FL HSCs/MPPs. Taken together, these results provide an essential resource for understanding HSC/MPP development in FL, and novel insight into functional HSC/MPP expansion ex vivo.
© 2021. The Author(s), under exclusive licence to Center for Excellence in Molecular Cell Science, CAS.

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Year:  2021        PMID: 34341490      PMCID: PMC8724330          DOI: 10.1038/s41422-021-00540-7

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  71 in total

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Journal:  Nature       Date:  2019-11-27       Impact factor: 49.962

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Journal:  Nature       Date:  2019-05-29       Impact factor: 49.962

Review 8.  Ontogeny of Tissue-Resident Macrophages.

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Journal:  Front Immunol       Date:  2015-09-22       Impact factor: 7.561

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Journal:  Development       Date:  2016-04-15       Impact factor: 6.868

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Authors:  Yeojin Lee; Juliana Leslie; Ying Yang; Lei Ding
Journal:  J Exp Med       Date:  2021-03-01       Impact factor: 14.307

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Review 3.  Recent Advances in Developmental Hematopoiesis: Diving Deeper With New Technologies.

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Review 4.  Clinical and translational values of spatial transcriptomics.

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5.  CD93 Correlates With Immune Infiltration and Impacts Patient Immunotherapy Efficacy: A Pan-Cancer Analysis.

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6.  A specialized bone marrow microenvironment for fetal haematopoiesis.

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7.  Immuno-localization of definitive hematopoietic stem cells in the vascular niche of mouse fetal liver.

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8.  Synergistic prostaglandin E synthesis by myeloid and endothelial cells promotes fetal hematopoietic stem cell expansion in vertebrates.

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