Literature DB >> 34337770

Transcriptome data-based identification of candidate genes involved in metabolism and accumulation of soluble sugars during fruit development in 'Huangguan' plum.

Xinmiao Yu1, Muhammad Moaaz Ali1, Binqi Li1,2, Ting Fang1, Faxing Chen1,2.   

Abstract

Fruit sweetness being an important factor of organoleptic quality directly affects the consumers' preferences for fresh fruit consumption, and is influenced by the composition and quantity of sugars. In this study, four soluble sugars (sucrose, fructose, glucose, and sorbitol) were identified and quantified in plum fruits cv. 'Huangguan' at four different maturity stages (fruitlet, green, veraison, and mature stage). The results revealed that sucrose and glucose are major soluble sugar components at the fruitlet and mature stages, respectively. RNA-Seq analysis was carried out and 6,778 differentially expressed genes (DEGs) were identified, including 121 genes involved in sugar metabolism. Furthermore, a total of 39 transcripts of 8 gene families encoding key enzymes related to the metabolism and accumulation of soluble sugars were separately identified. ERD6L (gene 103322904) was involved in keeping a balance of glucose between the inside and outside of vacuole. SS (gene 103333990) and SDH (gene 103335104) regulated the accumulation of fructose at the green stage. SDH (gene 103335104) controlled the degradation of sorbitol at the green stage. SS (gene 103333990) and PFK (gene 103333391) regulated the degradation of sucrose at the early stages of fruit development. Moreover, NINV (gene 103331108) regulated the accumulation of total sugar in plum. Genes 103321334 and 103335689 were important bZIP transcription factors that regulate the accumulation of glucose and fructose in fruits. Twelve DEGs were selected and validated to observe the relative accuracy of transcriptome sequencing data using qRT-PCR. Gene expression patterns were consistent between qRT-PCR and RNA-Seq data, indicating the reliability of RNA-Seq data. PRACTICAL APPLICATIONS: The results of this study provided new insights into comprehensive understanding of the genetic control of sugar metabolism and accumulation in plum fruits.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  HPLC; RNA-Seq; qRT-PCR; soluble sugars; sorbitol

Year:  2021        PMID: 34337770     DOI: 10.1111/jfbc.13878

Source DB:  PubMed          Journal:  J Food Biochem        ISSN: 0145-8884            Impact factor:   2.720


  2 in total

1.  Heat stress response in Chinese cabbage (Brassica rapa L.) revealed by transcriptome and physiological analysis.

Authors:  Lei Zhang; Yun Dai; Lixin Yue; Guohu Chen; Lingyun Yuan; Shifan Zhang; Fei Li; Hui Zhang; Guoliang Li; Shidong Zhu; Jinfeng Hou; Xiaoyan Tang; Shujiang Zhang; Chenggang Wang
Journal:  PeerJ       Date:  2022-05-25       Impact factor: 3.061

2.  Effect of Paper and Aluminum Bagging on Fruit Quality of Loquat (Eriobotrya japonica Lindl.).

Authors:  Cao Zhi; Muhammad Moaaz Ali; Junya Zhang; Meng Shi; Songfeng Ma; Faxing Chen
Journal:  Plants (Basel)       Date:  2021-12-09
  2 in total

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