Literature DB >> 34336372

Deep Learning Identification of Asthma Inhaler Techniques in Clinical Notes.

Bhavani Singh Agnikula Kshatriya1, Elham Sagheb1, Chung-Il Wi2, Jungwon Yoon3, Hee Yun Seol4, Young Juhn2, Sunghwan Sohn1.   

Abstract

There are significant variabilities in clinicians' guideline-concordant documentation in asthma care. However, assessing clinicians' documentation is not feasible using only structured data but requires labor intensive chart review of electronic health records. Although the national asthma guidelines are available it is still challenging to use them as a real-time tool for providing feedback on adhering documentation guidelines for asthma care improvement. A certain guideline element, such as teaching or reviewing inhaler techniques, is difficult to capture by handcrafted rules since it requires contextual understanding of clinical narratives. This study examined a deep learning based natural language model, Bidirectional Encoder Representations from Transformers (BERT) coupled with distant supervision to identify inhaler techniques from clinical narratives. The BERT model with distant supervision outperformed the rule-based approach and achieved performance gain compared with the BERT without distant supervision.

Entities:  

Keywords:  adherence to asthma guidelines; deep learning; documentation variations; natural language processing

Year:  2021        PMID: 34336372      PMCID: PMC8323494          DOI: 10.1109/bibm49941.2020.9313224

Source DB:  PubMed          Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)        ISSN: 2156-1125


  13 in total

1.  Natural Language Processing for Asthma Ascertainment in Different Practice Settings.

Authors:  Chung-Il Wi; Sunghwan Sohn; Mir Ali; Elizabeth Krusemark; Euijung Ryu; Hongfang Liu; Young J Juhn
Journal:  J Allergy Clin Immunol Pract       Date:  2017-06-19

2.  Application of a Natural Language Processing Algorithm to Asthma Ascertainment. An Automated Chart Review.

Authors:  Chung-Il Wi; Sunghwan Sohn; Mary C Rolfes; Alicia Seabright; Euijung Ryu; Gretchen Voge; Kay A Bachman; Miguel A Park; Hirohito Kita; Ivana T Croghan; Hongfang Liu; Young J Juhn
Journal:  Am J Respir Crit Care Med       Date:  2017-08-15       Impact factor: 21.405

3.  Summary health statistics for u.s. Adults: national health interview survey, 2004.

Authors:  Margaret Lethbridge-Çejku; Deborah Rose; Jackline Vickerie
Journal:  Vital Health Stat 10       Date:  2006-05

4.  Ascertainment of asthma prognosis using natural language processing from electronic medical records.

Authors:  Sunghwan Sohn; Chung-Il Wi; Stephen T Wu; Hongfang Liu; Euijung Ryu; Elizabeth Krusemark; Alicia Seabright; Gretchen A Voge; Young J Juhn
Journal:  J Allergy Clin Immunol       Date:  2018-02-10       Impact factor: 10.793

5.  Preventive asthma care delivery in the primary care office: missed opportunities for children with persistent asthma symptoms.

Authors:  Alison B Yee; Maria Fagnano; Jill S Halterman
Journal:  Acad Pediatr       Date:  2013-01-05       Impact factor: 3.107

6.  Vital signs: asthma prevalence, disease characteristics, and self-management education: United States, 2001--2009.

Authors: 
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2011-05-06       Impact factor: 17.586

7.  Implementing asthma guidelines using practice facilitation and local learning collaboratives: a randomized controlled trial.

Authors:  James W Mold; Chester Fox; Angela Wisniewski; Paula Darby Lipman; Margot R Krauss; D Robert Harris; Cheryl Aspy; Rachel A Cohen; Kurt Elward; Paul Frame; Barbara P Yawn; Leif I Solberg; René Gonin
Journal:  Ann Fam Med       Date:  2014 May-Jun       Impact factor: 5.166

8.  Automated chart review utilizing natural language processing algorithm for asthma predictive index.

Authors:  Harsheen Kaur; Sunghwan Sohn; Chung-Il Wi; Euijung Ryu; Miguel A Park; Kay Bachman; Hirohito Kita; Ivana Croghan; Jose A Castro-Rodriguez; Gretchen A Voge; Hongfang Liu; Young J Juhn
Journal:  BMC Pulm Med       Date:  2018-02-13       Impact factor: 3.317

9.  Clinical documentation variations and NLP system portability: a case study in asthma birth cohorts across institutions.

Authors:  Sunghwan Sohn; Yanshan Wang; Chung-Il Wi; Elizabeth A Krusemark; Euijung Ryu; Mir H Ali; Young J Juhn; Hongfang Liu
Journal:  J Am Med Inform Assoc       Date:  2018-03-01       Impact factor: 4.497

10.  Using distant supervision to augment manually annotated data for relation extraction.

Authors:  Peng Su; Gang Li; Cathy Wu; K Vijay-Shanker
Journal:  PLoS One       Date:  2019-07-30       Impact factor: 3.240

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