Literature DB >> 34336138

Prevalence of the SNP rs10774671 of the OAS1 gene in Mexico as a possible predisposing factor for RNA virus disease.

María Teresa Sánchez-González1, Oscar Cienfuegos-Jiménez1, Salomón Álvarez-Cuevas2, Antonio Ali Pérez-Maya3, Gissela Borrego-Soto4, Iván Alberto Marino-Martínez1,2.   

Abstract

The COVID-19 pandemic has revealed the susceptibility of certain populations to RNA virus infection. This variety of agents is currently the cause of severe respiratory diseases (SARS-CoV2 and Influenza), Hepatitis C, measles and of high prevalence tropical diseases that are detected throughout the year (Dengue and Zika). The rs10774671 polymorphism is a base change from G to A in the last nucleotide of intron-5 of the OAS1 gene. This change modifies a splicing site and generates isoforms of the OAS1 protein with a higher molecular weight and a demonstrated lower enzymatic activity. The low activity of these OAS1 isoforms makes the innate immune response against RNA virus infections less efficient, representing a previously unattended risk factor for certain populations.
OBJECTIVE: Determine the distribution of rs10774671 in the open population of Mexico.
METHODS: In 98 healthy volunteers, allelic and genotypic frequencies were determined by qPCR using allele specific labeled probes, and the Hardy-Weinberg equilibrium was determined.
RESULTS: The A-allele turned out to be the most prevalent in the analyzed population.
CONCLUSIONS: Our population is genetically susceptible to RNA virus disease due to the predominant presence of the A allele of rs10774671 in the OAS1 gene. IJMEG
Copyright © 2021.

Entities:  

Keywords:  2’,5’-oligoadenylate synthetase; Innate immunity; RNA virus infections; coronavirus infections; single nucleotide polymorphism

Year:  2021        PMID: 34336138      PMCID: PMC8310884     

Source DB:  PubMed          Journal:  Int J Mol Epidemiol Genet        ISSN: 1948-1756


  21 in total

1.  The Activation Mechanism of 2'-5'-Oligoadenylate Synthetase Gives New Insights Into OAS/cGAS Triggers of Innate Immunity.

Authors:  Jan Lohöfener; Nicola Steinke; Penelope Kay-Fedorov; Petra Baruch; Alexey Nikulin; Svetlana Tishchenko; Dietmar J Manstein; Roman Fedorov
Journal:  Structure       Date:  2015-04-16       Impact factor: 5.006

2.  Differential regulation of the OASL and OAS1 genes in response to viral infections.

Authors:  Jesper Melchjorsen; Helle Kristiansen; Rune Christiansen; Johanna Rintahaka; Sampsa Matikainen; Søren R Paludan; Rune Hartmann
Journal:  J Interferon Cytokine Res       Date:  2009-04       Impact factor: 2.607

3.  Genetic mechanisms of critical illness in COVID-19.

Authors:  Erola Pairo-Castineira; Sara Clohisey; Lucija Klaric; Andrew D Bretherick; Konrad Rawlik; Dorota Pasko; Susan Walker; Nick Parkinson; Max Head Fourman; Clark D Russell; James Furniss; Anne Richmond; Elvina Gountouna; Nicola Wrobel; David Harrison; Bo Wang; Yang Wu; Alison Meynert; Fiona Griffiths; Wilna Oosthuyzen; Athanasios Kousathanas; Loukas Moutsianas; Zhijian Yang; Ranran Zhai; Chenqing Zheng; Graeme Grimes; Rupert Beale; Jonathan Millar; Barbara Shih; Sean Keating; Marie Zechner; Chris Haley; David J Porteous; Caroline Hayward; Jian Yang; Julian Knight; Charlotte Summers; Manu Shankar-Hari; Paul Klenerman; Lance Turtle; Antonia Ho; Shona C Moore; Charles Hinds; Peter Horby; Alistair Nichol; David Maslove; Lowell Ling; Danny McAuley; Hugh Montgomery; Timothy Walsh; Alexandre C Pereira; Alessandra Renieri; Xia Shen; Chris P Ponting; Angie Fawkes; Albert Tenesa; Mark Caulfield; Richard Scott; Kathy Rowan; Lee Murphy; Peter J M Openshaw; Malcolm G Semple; Andrew Law; Veronique Vitart; James F Wilson; J Kenneth Baillie
Journal:  Nature       Date:  2020-12-11       Impact factor: 69.504

4.  Differential responses of innate immunity triggered by different subtypes of influenza a viruses in human and avian hosts.

Authors:  Yingying Cao; Yaowei Huang; Ke Xu; Yuanhua Liu; Xuan Li; Ye Xu; Wu Zhong; Pei Hao
Journal:  BMC Med Genomics       Date:  2017-12-21       Impact factor: 3.063

5.  Single nucleotide polymorphism at exon 7 splice acceptor site of OAS1 gene determines response of hepatitis C virus patients to interferon therapy.

Authors:  Mostafa K El Awady; Mohamed A Anany; Gamal Esmat; Naglaa Zayed; Ashraf A Tabll; Amr Helmy; Abdel Rahman El Zayady; Mohga S Abdalla; Hayat M Sharada; Maissa El Raziky; Wafaa El Akel; Shadia Abdalla; Noha G Bader El Din
Journal:  J Gastroenterol Hepatol       Date:  2011-05       Impact factor: 4.029

Review 6.  Intrinsic cellular defenses against virus infection by antiviral type I interferon.

Authors:  Kyung-Hyun Boo; Joo-Sung Yang
Journal:  Yonsei Med J       Date:  2009-12-29       Impact factor: 2.759

7.  Genetic variation in OAS1 is a risk factor for initial infection with West Nile virus in man.

Authors:  Jean K Lim; Andrea Lisco; David H McDermott; Linda Huynh; Jerrold M Ward; Bernard Johnson; Hope Johnson; John Pape; Gregory A Foster; David Krysztof; Dean Follmann; Susan L Stramer; Leonid B Margolis; Philip M Murphy
Journal:  PLoS Pathog       Date:  2009-02-27       Impact factor: 6.823

8.  Activation of 2' 5'-oligoadenylate synthetase by stem loops at the 5'-end of the West Nile virus genome.

Authors:  Soumya Deo; Trushar R Patel; Edis Dzananovic; Evan P Booy; Khalid Zeid; Kevin McEleney; Stephen E Harding; Sean A McKenna
Journal:  PLoS One       Date:  2014-03-20       Impact factor: 3.240

Review 9.  IFN-λ: A new spotlight in innate immunity against influenza virus infection.

Authors:  Yeping Sun; Jingwen Jiang; Po Tien; Wenjun Liu; Jing Li
Journal:  Protein Cell       Date:  2018-10       Impact factor: 14.870

10.  Mapping genome variation of SARS-CoV-2 worldwide highlights the impact of COVID-19 super-spreaders.

Authors:  Alberto Gómez-Carballa; Xabier Bello; Jacobo Pardo-Seco; Federico Martinón-Torres; Antonio Salas
Journal:  Genome Res       Date:  2020-09-02       Impact factor: 9.043

View more
  1 in total

1.  CASA: a comprehensive database resource for the COVID-19 Alternative Splicing Atlas.

Authors:  Yaxin Chen; Gang Wang; Jingyi Li; Lei Xia; Lin Zhu; Wenxing Li; Qiang Luo; Yinlu Liao; Yao Lin; Liyun Bi; Hubin Chen; Jiemei Chu; Yueqi Li; Jinming Su; Li Ye; Jun-Jun Jiang; Hao Liang; Weimin Li; Sanqi An
Journal:  J Transl Med       Date:  2022-10-20       Impact factor: 8.440

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.