| Literature DB >> 34330247 |
Huan Chen1, Yingying Ma2, Na Hong2, Hao Wang1, Longxiang Su1, Chun Liu2, Jie He2, Huizhen Jiang3, Yun Long4, Weiguo Zhu5,6.
Abstract
BACKGROUND: Regional citrate anticoagulation (RCA) is an important local anticoagulation method during bedside continuous renal replacement therapy. To improve patient safety and achieve computer assisted dose monitoring and control, we took intensive care units patients into cohort and aiming at developing a data-driven machine learning model to give early warning of citric acid overdose and provide adjustment suggestions on citrate pumping rate and 10% calcium gluconate input rate for RCA treatment.Entities:
Keywords: Anticoagulants; Continuous renal replacement therapy; Intensive care units; Machine learning
Year: 2021 PMID: 34330247 PMCID: PMC8323216 DOI: 10.1186/s12911-021-01489-8
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Fig. 1The machine learning based early warning and adjustment for local regional citrate anticoagulation therapy
Fig. 2Patient data selection event timeline
Summary Statistics of PUMCH ICU dataset
| Features | Outcomes (post-filter ionized calcium levels) | |||
|---|---|---|---|---|
| < 0.25 mmol/L | 0.25–0.35 mmol/L | 0.35–0.5 mmol/L | > 0.5 mmol/L | |
| 84 | 379 | 802 | 238 | |
| Age | 62.98 (15.06) | 59.65 (15.14) | 56.01 (15.89) | 56.86 (15.56) |
| Temperature | 36.64 (0.62) | 36.58 (0.62) | 36.61 (0.67) | 36.58 (0.70) |
| Replacement fluid pH value | 7.21 (0.17) | 7.25 (0.12) | 7.27 (0.09) | 7.29 (0.09) |
| Value of citrate | 207.94 (82.20) | 201.86 (34.90) | 201.64 (52.70) | 169.49 (60.35) |
| 5% NaHCO3 | 75.41 (31.47) | 75.50 (32.38) | 73.95 (34.07) | 83.43 (38.06) |
| Replacement fluid | 1880.82 (1234.24) | 1879.92 (929.15) | 1820.23 (740.11) | 1685.53 (509.19) |
| Gender, n (%) | ||||
| Male | 67.86 (%) | 63.06 (%) | 65.84 (%) | 65.13 (%) |
| Female | 32.14 (%) | 36.94 (%) | 34.16 (%) | 34.87 (%) |
| 20 | 100 | 219 | 92 | |
| Age | 58.50 (15.83) | 60.67 (14.68) | 59.39 (15.14) | 63.00 (12.56) |
| Temperature | 36.43 (0.65) | 36.41 (0.56) | 36.40 (0.66) | 36.41 (0.63) |
| Replacement fluid PH value | 7.36 (0.07) | 7.36 (0.07) | 7.36 (0.06) | 7.35 (0.07) |
| Value of citrate | 196.48 (77.69) | 185.27 (84.73) | 172.48 (60.07) | 132.83 (42.09) |
| 5% NaHCO3 | 41.79 (31.09) | 48.05 (34.92) | 53.57 (36.02) | 66.25 (43.49) |
| Replacement fluid | 1770.55 (645.64) | 1850.79 (974.67) | 1698.43 (543.06) | 1649.49 (820.87) |
| Gender, n (%) | ||||
| Male | 65.00 (%) | 73.00 (%) | 64.38 (%) | 40.22 (%) |
| Female | 35.00 (%) | 27.00 (%) | 35.62 (%) | 59.78 (%) |
Model performances for predicting post-filter ionized calcium levels
| Labels | Models | Precision (%) | Recall (%) | F1-score (%) | Accuracy (%) |
|---|---|---|---|---|---|
| “0”: < 0.25 mmol/L | AdaBoost | 70.43 | 69.61 | 69.99 | 77.94 |
| XGBoost | 83.73 | 79.41 | 81.20 | 86.76 | |
| SVM | 67.65 | 71.22 | 83.82 | ||
| Shallow neural network | 90.76 | ||||
| “1”: 0.25–0.35 mmol/L | AdaBoost | 67.39 | 59.21 | 60.04 | 76.32 |
| XGBoost | 82.65 | 78.54 | 86.41 | 85.17 | |
| SVM | 77.41 | 79.72 | 86.25 | ||
| Shallow neural network | 88.45 | ||||
| “2”: 0.35–0.5 mmol/L | AdaBoost | 70.22 | 59.11 | 59.85 | 77.17 |
| XGBoost | 83.77 | ||||
| SVM | 81.07 | 80.89 | 81.87 | 81.89 | |
| Shallow neural network | 83.74 | ||||
| “3”: > 0.5 mmol/L | AdaBoost | 73.15 | 68.40 | 70.03 | 79.69 |
| XGBoost | 83.91 | 81.94 | 82.85 | 87.50 | |
| SVM | 68.75 | 72.56 | 84.38 | ||
| Shallow neural network | 88.98 |
The bold means the best performed model for each evaluation indicator
Performance of the recommend shallow neural network classifier models in validation dataset
| Labels | AUC | Precision (%) | Recall (%) | F1-score (%) | Accuracy (%) |
|---|---|---|---|---|---|
| “0”: < 0.25 mmol/L | 0.8638 | 80.00 | 80.00 | 80.00 | 80.00 |
| “1”: 0.25–0.35 mmol/L | 0.8086 | 80.75 | 80.50 | 80.46 | 80.50 |
| “2”: 0.35–0.5 mmol/L | 0.8466 | 80.37 | 80.37 | 80.37 | 80.36 |
| “3”: > 0.5 mmol/L | 0.7919 | 78.45 | 78.00 | 78.90 | 78.32 |
Fig. 3ROC curves and AUC for each classifier
Feature significance by LASSO regression
| Gender | Age | Value of citrate | 5%NaHCO3 | PH of replacement fluid | Replacement fluid | Temperature |
|---|---|---|---|---|---|---|
| 0.000000000 | 0.0000000 | 0.00000000 | 0.00000000 | 0.000000000 | 0.00000000 | 0.00000000 |
| 0.000000000 | 0.00000000 | 0.00000000 | 0.0000000 | 0.02172580 | 0.000000000 | 0.00000000 |
| 0.000000000 | 0.00000000 | − 0.03739033 | 0.0000000 | 0.05911613 | 0.000000000 | 0.00000000 |
| 0.000000000 | − 0.02880499 | − 0.06103975 | 0.0000000 | 0.07894143 | 0.000000000 | 0.00000000 |
| 0.000000000 | − 0.10513137 | − 0.13510577 | 0.1056217 | 0.16482696 | 0.000000000 | 0.00000000 |
| 0.000000000 | − 0.11214836 | − 0.14049981 | 0.1159727 | 0.17347107 | − 0.004691875 | 0.00000000 |
| 0.000000000 | − 0.12624543 | − 0.14999870 | 0.1331873 | 0.18787215 | − 0.012946584 | − 0.01223604 |
| 0.005256983 | − 0.13273391 | − 0.15501799 | 0.1405570 | 0.19460279 | − 0.016788690 | − 0.01857270 |
Citric acid overdose distribution on four patient groups
| Post-filter ionized calcium levels | Average number of records of citric acid overdosing | Randomly selected number of records |
|---|---|---|
| < 0.25 mmol/L | 36 | 400/10 rounds |
| 0.25–0.35 mmol/L | 34 | 400/10 rounds |
| 0.35–0.5 mmol/L | 31 | 400/10 rounds |
| > 0.5 mmol/L | 21 | 400/10 rounds |
Adjustment suggestions on citrate pumping rate
| Post-filter ionized calcium levels (mmol/L) | Citrate pumping rate |
|---|---|
| < 0.25 | Reduce 10 mL/h |
| 0.25–0.35 | Stay still |
| 0.35–0.5 | Increase 10 mL/h |
| > 0.5 | Increase 20 mL/h |
Adjustment suggestions on 10% calcium gluconate input rate
| Arterial or venous ionized calcium (mmol/L) | 10% calcium gluconate input rate |
|---|---|
| > 1.45 | Reduce 1.5 mL/h |
| 1.21–1.45 | Reduce 0.8 mL/h |
| 1.00–1.20 | Stay still |
| 0.90–1.00 | Increase 0.8 mL/h |
| < 0.9 | After static pushing 10 mL, increase 1.5 mL/h |