| Literature DB >> 34327239 |
Saima Rafique1, Farukh Kiyani1, Sumbal Jawaid2, Rubina Nasir1, Mahmoosh Ahmad3, Shazia Bashir4, Muhammad Idress5, Jan Sher Khan1, Rizwan Akram1.
Abstract
The fabrication of sensitive protein microarrays such as PCR used in DNA microarray is challenging due to lack of signal amplification. The development of microarrays is utilized to improve the sensitivity and limitations of detection towards primal cancer detection. The sensitivity is enhanced by the use of ZnO-nanorods and is investigated as a substrate which enhance the florescent signal to diagnose the hepatocellular carcinoma (HCC) at early stages. The substrate for deposition of ZnO-nanorods is prepared by the conventional chemical bath deposition method. The resultant highly dense ZnO-nanorods enhance the fluorescent signal 7.2 times as compared to the substrate without ZnO-nanorods. The microarray showed sensitivity of 1504.7 ng ml-1 and limit of detection of 0.1 pg ml-1 in wide dynamic range of 0.05 pg-10 μg ml-1 for alpha fetoprotein (AFP) detection in 10% human serum. This immunoassay was successfully applied for human serum samples to detect tumor marker with good recoveries. The ZnO-nanorod substrate is a simple protein microarray which showed a great promise for developing a low-cost, sensitive, and high-throughput protein assay platform for several applications in both fundamental research and clinical diagnosis.Entities:
Year: 2021 PMID: 34327239 PMCID: PMC8302379 DOI: 10.1155/2021/9916909
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Schematic illustration of different steps for preparation of protein microarray in step A and detetcion of different concentrations of alpha fetoprotein biomarker in step B.
Figure 2(a, b) SEM images, (c) the EDX spectra, and (d) the XRD pattern obtained for the ZnO-nanorods grown on glass slide by the chemical bath method.
Figure 3Efficiency of fluorescence microarray towards detection of AFP. (a) The effect on fluorescence signal by synthesizing ZnO-nanorods on substrate. (b) Effect of different types of regeneration solution on residual activity. (c) The effect of incubation time towards detection of AFP.
Figure 4Microarray slide containing different concentrations of AFP ranges from 0 pg ml−1 to 10 μg ml−1 AFP antigen solutions followed with cy3-labeled anti-rabbit IgG. (b) Calibration curve of microarray at different concentrations of AFP.
Performance parameters of prepared antibody microarray for AFP detection.
| LOD pg ml−1 | Dynamic range | Linear equation |
| Sensitivity ng ml−1 |
|---|---|---|---|---|
| 0.1 | 0.05 pg-10 | 1504.7 log( | 0.9565 | 1504.7 |
Interassay variation coefficient result for AFP concentration 10 pg ml−1.
| Standard samples, | Fluorescent intensity (mean) | Standard deviation of mean | % CV of mean |
|---|---|---|---|
| Low signal | 3576 | 187 | 2.2 |
| High signal | 3987 | 247 | 1.7 |
Figure 5Surface topography images of (a) after immobilization of anti-AFP (a1) after attachment of AFP (a2) microarray after use of regeneration solution. (b) Relationship between the percentage change in fluorescence signal and cycles of regeneration.
Figure 6Responses of immunoassay for detetcion of AFP with different interferences and comparison of analyte with mixture of analytes.
Comparison results of microarray (n = 5) and the conventional method (ELFA method) for the detection of AFP inhuman serum samples.
| AFP (ng ml−1) | RSD (%) | Ref. | |
|---|---|---|---|
| Found | |||
| Human serum 1 | 10.24 ± 0.07 | 1.02 | 10.24 |
| Human serum 2 | — | — | — |
| Human serum 3 | 173.59 ± 0.05 | 0.07 | 173.55 |
| Human serum 4 | 220.00 ± 0.01 | 0.34 | 223.00 |
| Human serum 5 | 420.10 ± 0.04 | 1.6 | 420.80 |
| Human serum 6 | 351.81 ± 0.03 | 0.82 | 352.22 |
| Human serum 7 | — | — | — |
| Human serum 8 | — | — | — |
| Human serum 9 | 922.22 ± 0.7 | 0.8 | 920.00 |
| Human serum 10 | 8.87 ± 0.01 | 0.97 | 8.88 |
The average recoveries (n = 5) with the relative standard deviations of AFP in human serum samples.
| Spiked (ng ml−1) | AFP | RSD (%) | |
|---|---|---|---|
| Recovery (%) | |||
| Human serum 1 | 1 | 96.12 ± 0.07 | 0.81 |
| 10 | 96.28 ± 0.21 | 2.20 | |
| 100 | 95.10 ± 0.21 | 3.10 | |
|
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| Human serum 2 | 1 | 97.75 ± 0.04 | 0.70 |
| 10 | 97.91 ± 0.02 | 1.90 | |
| 100 | 98.59 ± 0.06 | 0.79 | |
|
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| Human serum 3 | 1 | 96.30 ± 0.10 | 1.20 |
| 10 | 95.80 ± 0.10 | 1.50 | |
| 100 | 96.10 ± 0.30 | 1.90 | |
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| Human serum 4 | 1 | 97.49 ± 0.02 | 0.30 |
| 10 | 95.68 ± 0.07 | 0.77 | |
| 100 | 96.10 ± 0.30 | 2.00 | |
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| Human serum 5 | 1 | 97.50 ± 0.06 | 4.40 |
| 10 | 93.40 ± 0.05 | 0.85 | |
| 100 | 95.22 ± 0.09 | 3.30 | |
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| Human serum 6 | 1 | 94.10 ± 0.40 | 3.20 |
| 10 | 93.40 ± 0.05 | 0.40 | |
| 100 | 94.20 ± 0.40 | 6.00 | |
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| Human serum 7 | 1 | 99.02 ± 0.08 | 1.02 |
| 10 | 95.90 ± 0.20 | 3.90 | |
| 100 | 96.50 ± 0.08 | 4.60 | |
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| Human serum 8 | 1 | 93.36 ± 0.07 | 1.03 |
| 10 | 97.40 ± 0.09 | 1.37 | |
| 100 | 97.40 ± 0.09 | 0.79 | |
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| Human serum 9 | 1 | 97.63 ± 0.05 | 1.40 |
| 10 | 96.80 ± 0.50 | 0.77 | |
| 100 | 98.65 ± 0.05 | 2.00 | |
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| Human serum 10 | 1 | 96.11 ± 0.20 | 3.00 |
| 10 | 96.51 ± 0.06 | 0.87 | |
| 100 | 97.23 ± 0.10 | 0.71 | |