Literature DB >> 34326379

Higher-order temporal network effects through triplet evolution.

Qing Yao1,2, Bingsheng Chen3, Tim S Evans3, Kim Christensen3.   

Abstract

We study the evolution of networks through 'triplets'-three-node graphlets. We develop a method to compute a transition matrix to describe the evolution of triplets in temporal networks. To identify the importance of higher-order interactions in the evolution of networks, we compare both artificial and real-world data to a model based on pairwise interactions only. The significant differences between the computed matrix and the calculated matrix from the fitted parameters demonstrate that non-pairwise interactions exist for various real-world systems in space and time, such as our data sets. Furthermore, this also reveals that different patterns of higher-order interaction are involved in different real-world situations. To test our approach, we then use these transition matrices as the basis of a link prediction algorithm. We investigate our algorithm's performance on four temporal networks, comparing our approach against ten other link prediction methods. Our results show that higher-order interactions in both space and time play a crucial role in the evolution of networks as we find our method, along with two other methods based on non-local interactions, give the best overall performance. The results also confirm the concept that the higher-order interaction patterns, i.e., triplet dynamics, can help us understand and predict the evolution of different real-world systems.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34326379     DOI: 10.1038/s41598-021-94389-w

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  14 in total

1.  Network motifs: simple building blocks of complex networks.

Authors:  R Milo; S Shen-Orr; S Itzkovitz; N Kashtan; D Chklovskii; U Alon
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

2.  Biological network comparison using graphlet degree distribution.

Authors:  Natasa Przulj
Journal:  Bioinformatics       Date:  2007-01-15       Impact factor: 6.937

3.  More is different.

Authors:  P W Anderson
Journal:  Science       Date:  1972-08-04       Impact factor: 47.728

4.  Modeling interactome: scale-free or geometric?

Authors:  N Przulj; D G Corneil; I Jurisica
Journal:  Bioinformatics       Date:  2004-07-29       Impact factor: 6.937

5.  Higher-order organization of complex networks.

Authors:  Austin R Benson; David F Gleich; Jure Leskovec
Journal:  Science       Date:  2016-07-08       Impact factor: 47.728

6.  Self-similar correlation function in brain resting-state functional magnetic resonance imaging.

Authors:  Paul Expert; Renaud Lambiotte; Dante R Chialvo; Kim Christensen; Henrik Jeldtoft Jensen; David J Sharp; Federico Turkheimer
Journal:  J R Soc Interface       Date:  2010-09-22       Impact factor: 4.118

7.  Homological scaffolds of brain functional networks.

Authors:  G Petri; P Expert; F Turkheimer; R Carhart-Harris; D Nutt; P J Hellyer; F Vaccarino
Journal:  J R Soc Interface       Date:  2014-12-06       Impact factor: 4.118

8.  From networks to optimal higher-order models of complex systems.

Authors:  Renaud Lambiotte; Martin Rosvall; Ingo Scholtes
Journal:  Nat Phys       Date:  2019-03-25       Impact factor: 20.034

9.  High-order interactions distort the functional landscape of microbial consortia.

Authors:  Alicia Sanchez-Gorostiaga; Djordje Bajić; Melisa L Osborne; Juan F Poyatos; Alvaro Sanchez
Journal:  PLoS Biol       Date:  2019-12-12       Impact factor: 8.029

Review 10.  Two's company, three (or more) is a simplex : Algebraic-topological tools for understanding higher-order structure in neural data.

Authors:  Chad Giusti; Robert Ghrist; Danielle S Bassett
Journal:  J Comput Neurosci       Date:  2016-06-11       Impact factor: 1.621

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.