Literature DB >> 34326310

Identification of pleiotropy at the gene level between psychiatric disorders and related traits.

Tatiana Polushina1,2, Niladri Banerjee1,2, Sudheer Giddaluru1,2, Francesco Bettella3,4, Thomas Espeseth4,5, Astri J Lundervold6, Srdjan Djurovic1,7, Sven Cichon8,9,10, Per Hoffmann9,11, Markus M Nöthen11, Vidar M Steen1,2, Ole A Andreassen3,4, Stéphanie Le Hellard12,13.   

Abstract

Major mental disorders are highly prevalent and make a substantial contribution to the global disease burden. It is known that mental disorders share clinical characteristics, and genome-wide association studies (GWASs) have recently provided evidence for shared genetic factors as well. Genetic overlaps are usually identified at the single-marker level. Here, we aimed to identify genetic overlaps at the gene level between 7 mental disorders (schizophrenia, autism spectrum disorder, major depressive disorder, anorexia nervosa, ADHD, bipolar disorder and anxiety), 8 brain morphometric traits, 2 cognitive traits (educational attainment and general cognitive function) and 9 personality traits (subjective well-being, depressive symptoms, neuroticism, extraversion, openness to experience, agreeableness and conscientiousness, children's aggressive behaviour, loneliness) based on publicly available GWASs. We performed systematic conditional regression analyses to identify independent signals and select loci associated with more than one trait. We identified 48 genes containing independent markers associated with several traits (pleiotropy at the gene level). We also report 9 genes with different markers that show independent associations with single traits (allelic heterogeneity). This study demonstrates that mental disorders and related traits do show pleiotropy at the gene level as well as the single-marker level. The identification of these genes might be important for prioritizing further deep genotyping, functional studies, or drug targeting.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34326310     DOI: 10.1038/s41398-021-01530-4

Source DB:  PubMed          Journal:  Transl Psychiatry        ISSN: 2158-3188            Impact factor:   6.222


  70 in total

1.  Boosting the power of schizophrenia genetics by leveraging new statistical tools.

Authors:  Ole A Andreassen; Wesley K Thompson; Anders M Dale
Journal:  Schizophr Bull       Date:  2013-12-06       Impact factor: 9.306

2.  Meta-analysis of the heritability of human traits based on fifty years of twin studies.

Authors:  Tinca J C Polderman; Beben Benyamin; Christiaan A de Leeuw; Patrick F Sullivan; Arjen van Bochoven; Peter M Visscher; Danielle Posthuma
Journal:  Nat Genet       Date:  2015-05-18       Impact factor: 38.330

3.  Novel Loci Associated With Attention-Deficit/Hyperactivity Disorder Are Revealed by Leveraging Polygenic Overlap With Educational Attainment.

Authors:  Alexey A Shadrin; Olav B Smeland; Tetyana Zayats; Andrew J Schork; Oleksandr Frei; Francesco Bettella; Aree Witoelar; Wen Li; Jon A Eriksen; Florian Krull; Srdjan Djurovic; Stephen V Faraone; Ted Reichborn-Kjennerud; Wesley K Thompson; Stefan Johansson; Jan Haavik; Anders M Dale; Yunpeng Wang; Ole A Andreassen
Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2017-11-26       Impact factor: 8.829

4.  Improved detection of common variants associated with schizophrenia by leveraging pleiotropy with cardiovascular-disease risk factors.

Authors:  Ole A Andreassen; Srdjan Djurovic; Wesley K Thompson; Andrew J Schork; Kenneth S Kendler; Michael C O'Donovan; Dan Rujescu; Thomas Werge; Martijn van de Bunt; Andrew P Morris; Mark I McCarthy; J Cooper Roddey; Linda K McEvoy; Rahul S Desikan; Anders M Dale
Journal:  Am J Hum Genet       Date:  2013-01-31       Impact factor: 11.025

5.  Genetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53949).

Authors:  G Davies; N Armstrong; J C Bis; J Bressler; V Chouraki; S Giddaluru; E Hofer; C A Ibrahim-Verbaas; M Kirin; J Lahti; S J van der Lee; S Le Hellard; T Liu; R E Marioni; C Oldmeadow; I Postmus; A V Smith; J A Smith; A Thalamuthu; R Thomson; V Vitart; J Wang; L Yu; L Zgaga; W Zhao; R Boxall; S E Harris; W D Hill; D C Liewald; M Luciano; H Adams; D Ames; N Amin; P Amouyel; A A Assareh; R Au; J T Becker; A Beiser; C Berr; L Bertram; E Boerwinkle; B M Buckley; H Campbell; J Corley; P L De Jager; C Dufouil; J G Eriksson; T Espeseth; J D Faul; I Ford; R F Gottesman; M E Griswold; V Gudnason; T B Harris; G Heiss; A Hofman; E G Holliday; J Huffman; S L R Kardia; N Kochan; D S Knopman; J B Kwok; J-C Lambert; T Lee; G Li; S-C Li; M Loitfelder; O L Lopez; A J Lundervold; A Lundqvist; K A Mather; S S Mirza; L Nyberg; B A Oostra; A Palotie; G Papenberg; A Pattie; K Petrovic; O Polasek; B M Psaty; P Redmond; S Reppermund; J I Rotter; H Schmidt; M Schuur; P W Schofield; R J Scott; V M Steen; D J Stott; J C van Swieten; K D Taylor; J Trollor; S Trompet; A G Uitterlinden; G Weinstein; E Widen; B G Windham; J W Jukema; A F Wright; M J Wright; Q Yang; H Amieva; J R Attia; D A Bennett; H Brodaty; A J M de Craen; C Hayward; M A Ikram; U Lindenberger; L-G Nilsson; D J Porteous; K Räikkönen; I Reinvang; I Rudan; P S Sachdev; R Schmidt; P R Schofield; V Srikanth; J M Starr; S T Turner; D R Weir; J F Wilson; C van Duijn; L Launer; A L Fitzpatrick; S Seshadri; T H Mosley; I J Deary
Journal:  Mol Psychiatry       Date:  2015-02-03       Impact factor: 15.992

6.  Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of concept.

Authors:  Barbara Franke; Jason L Stein; Stephan Ripke; Michael C O'Donovan; Paul M Thompson; Benjamin M Neale; Sarah E Medland; Patrick F Sullivan; Verneri Anttila; Derrek P Hibar; Kimm J E van Hulzen; Alejandro Arias-Vasquez; Jordan W Smoller; Thomas E Nichols; Michael C Neale; Andrew M McIntosh; Phil Lee; Francis J McMahon; Andreas Meyer-Lindenberg; Manuel Mattheisen; Ole A Andreassen; Oliver Gruber; Perminder S Sachdev; Roberto Roiz-Santiañez; Andrew J Saykin; Stefan Ehrlich; Karen A Mather; Jessica A Turner; Emanuel Schwarz; Anbupalam Thalamuthu; Yin Yao Shugart; Yvonne Yw Ho; Nicholas G Martin; Margaret J Wright
Journal:  Nat Neurosci       Date:  2016-02-01       Impact factor: 24.884

7.  Multi-trait analysis of genome-wide association summary statistics using MTAG.

Authors:  Patrick Turley; Raymond K Walters; Omeed Maghzian; Aysu Okbay; James J Lee; Mark Alan Fontana; Tuan Anh Nguyen-Viet; Robbee Wedow; Meghan Zacher; Nicholas A Furlotte; Patrik Magnusson; Sven Oskarsson; Magnus Johannesson; Peter M Visscher; David Laibson; David Cesarini; Benjamin M Neale; Daniel J Benjamin
Journal:  Nat Genet       Date:  2018-01-01       Impact factor: 38.330

8.  Improved detection of common variants associated with schizophrenia and bipolar disorder using pleiotropy-informed conditional false discovery rate.

Authors:  Ole A Andreassen; Wesley K Thompson; Andrew J Schork; Stephan Ripke; Morten Mattingsdal; John R Kelsoe; Kenneth S Kendler; Michael C O'Donovan; Dan Rujescu; Thomas Werge; Pamela Sklar; J Cooper Roddey; Chi-Hua Chen; Linda McEvoy; Rahul S Desikan; Srdjan Djurovic; Anders M Dale
Journal:  PLoS Genet       Date:  2013-04-25       Impact factor: 5.917

9.  Identification of Gene Loci That Overlap Between Schizophrenia and Educational Attainment.

Authors:  Stéphanie Le Hellard; Yunpeng Wang; Aree Witoelar; Verena Zuber; Francesco Bettella; Kenneth Hugdahl; Thomas Espeseth; Vidar M Steen; Ingrid Melle; Rahul Desikan; Andrew J Schork; Wesley K Thompson; Anders M Dale; Srdjan Djurovic; Ole A Andreassen
Journal:  Schizophr Bull       Date:  2017-05-01       Impact factor: 7.348

10.  An atlas of genetic correlations across human diseases and traits.

Authors:  Brendan Bulik-Sullivan; Hilary K Finucane; Verneri Anttila; Alexander Gusev; Felix R Day; Po-Ru Loh; Laramie Duncan; John R B Perry; Nick Patterson; Elise B Robinson; Mark J Daly; Alkes L Price; Benjamin M Neale
Journal:  Nat Genet       Date:  2015-09-28       Impact factor: 38.330

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  2 in total

1.  Fully exploiting SNP arrays: a systematic review on the tools to extract underlying genomic structure.

Authors:  Laura Balagué-Dobón; Alejandro Cáceres; Juan R González
Journal:  Brief Bioinform       Date:  2022-03-10       Impact factor: 11.622

2.  From Genes to Therapy in Autism Spectrum Disorder.

Authors:  Jacob A S Vorstman; Christine M Freitag; Antonio M Persico
Journal:  Genes (Basel)       Date:  2022-08-01       Impact factor: 4.141

  2 in total

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