Literature DB >> 34312841

Liquid biopsy: a non-invasive approach for Hodgkin lymphoma genotyping.

Miguel Alcoceba1, María García-Álvarez1, M Carmen Chillón1, Cristina Jiménez1, Alejandro Medina1, Alicia Antón1, Oscar Blanco2, Luis G Díaz3, Pilar Tamayo3, Verónica González-Calle1, María Jesús Vidal4, Rebeca Cuello5, Francisco Javier Díaz Gálvez5, José Antonio Queizán6, Alejandro Martín1, Marcos González1, Ramón García-Sanz1, M Eugenia Sarasquete1.   

Abstract

The Hodgkin lymphoma (HL) genomic landscape is hardly known due to the scarcity of tumour cells in the tissue. Liquid biopsy employing circulating tumour DNA (ctDNA) can emerge as an alternative tool for non-invasive genotyping. By using a custom next generation sequencing (NGS) panel in combination with unique molecule identifiers, we aimed to identify somatic variants in the ctDNA of 60 HL at diagnosis. A total of 277 variants were detected in 36 of the 49 samples (73·5%) with a good quality ctDNA sample. The median number of variants detected per patient was five (range 1-23) with a median variant allele frequency of 4·2% (0·84-28%). Genotyping revealed somatic variants in the following genes: SOCS1 (28%), IGLL5 (26%), TNFAIP3 (23%), GNA13 (23%), STAT6 (21%) and B2M (19%). Moreover, several poor prognosis features (high LDH, low serum albumin, B-symptoms, IPI ≥ 3 or at an advanced stage) were related to significantly higher amounts of ctDNA. Variant detection in ctDNA by NGS is a feasible approach to depict the genetic features of HL patients at diagnosis. Our data favour the implementation of liquid biopsy genotyping for the routine evaluation of HL patients.
© 2021 British Society for Haematology and John Wiley & Sons Ltd.

Entities:  

Keywords:  Hodgkin lymphoma; circulating tumour DNA; liquid biopsy; next generation sequencing

Mesh:

Substances:

Year:  2021        PMID: 34312841     DOI: 10.1111/bjh.17719

Source DB:  PubMed          Journal:  Br J Haematol        ISSN: 0007-1048            Impact factor:   6.998


  4 in total

Review 1.  The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review.

Authors:  Antonio Santisteban-Espejo; Irene Bernal-Florindo; Jose Perez-Requena; Lidia Atienza-Cuevas; Julia Moran-Sanchez; María Del Carmen Fernandez-Valle; Raquel Romero-Garcia; Marcial Garcia-Rojo
Journal:  Diagnostics (Basel)       Date:  2022-04-12

2.  Nomogram model and risk score predicting overall survival and guiding clinical decision in patients with Hodgkin's lymphoma: an observational study using SEER population-based data.

Authors:  Xiangping Liang; Mingtao Zhang; Zherui Zhang; Shuzhen Tan; Yingqi Li; Yueyuan Zhong; Yingqi Shao; Yi Kong; Yue Yang; Shang Li; Jiayi Xu; Zesong Li; Xiao Zhu
Journal:  BMJ Open       Date:  2022-06-07       Impact factor: 3.006

Review 3.  Novel Approaches in Molecular Characterization of Classical Hodgkin Lymphoma.

Authors:  Diede A G van Bladel; Wendy B C Stevens; Michiel van den Brand; Leonie I Kroeze; Patricia J T A Groenen; J Han J M van Krieken; Konnie M Hebeda; Blanca Scheijen
Journal:  Cancers (Basel)       Date:  2022-06-30       Impact factor: 6.575

Review 4.  Circulating tumor DNA in Hodgkin lymphoma.

Authors:  Maria Maco; Kristyna Kupcova; Vaclav Herman; Iva Ondeckova; Tomas Kozak; Heidi Mocikova; Ondrej Havranek
Journal:  Ann Hematol       Date:  2022-09-08       Impact factor: 4.030

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.