Literature DB >> 34312464

Commuting in metapopulation epidemic modeling.

Azi Lipshtat1, Roger Alimi2, Yochai Ben-Horin2.   

Abstract

The COVID-19 pandemic led authorities all over the world to imposing travel restrictions both on a national and on an international scale. Understanding the effect of such restrictions requires analysis of the role of commuting and calls for a metapopulation modeling that incorporates both local, intra-community infection and population exchange between different locations. Standard metapopulation models are formulated as markovian processes, and as such they do not label individuals according to their original location. However, commuting from home to work and backwards (reverse commuting) is the main pattern of transportation. Thus, it is important to be able to accurately model the effect of commuting on epidemic spreading. In this study we develop a methodology for modeling bidirectional commuting of individuals, without keeping track of each individual separately and with no need of proliferation of number of compartments beyond those defined by the epidemiologic model. We demonstrate the method using a city map of the state of Israel. The presented algorithm does not require any special computation resources and it may serve as a basis for intervention strategy examination in various levels of complication and resolution. We show how to incorporate an epidemiological model into a metapopulation commuting scheme while preserving the internal logic of the epidemiological modeling. The method is general and independent on the details of the epidemiological model under consideration.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34312464     DOI: 10.1038/s41598-021-94672-w

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  8 in total

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Authors:  Sebastian Funk; Marcel Salathé; Vincent A A Jansen
Journal:  J R Soc Interface       Date:  2010-05-26       Impact factor: 4.118

2.  The implications of network structure for epidemic dynamics.

Authors:  Matt Keeling
Journal:  Theor Popul Biol       Date:  2005-02       Impact factor: 1.570

3.  Epidemic modeling in metapopulation systems with heterogeneous coupling pattern: theory and simulations.

Authors:  Vittoria Colizza; Alessandro Vespignani
Journal:  J Theor Biol       Date:  2007-11-29       Impact factor: 2.691

4.  Special report: The simulations driving the world's response to COVID-19.

Authors:  David Adam
Journal:  Nature       Date:  2020-04       Impact factor: 49.962

5.  A structured epidemic model incorporating geographic mobility among regions.

Authors:  L Sattenspiel; K Dietz
Journal:  Math Biosci       Date:  1995 Jul-Aug       Impact factor: 2.144

6.  Modeling the spatial spread of infectious diseases: the GLobal Epidemic and Mobility computational model.

Authors:  Duygu Balcan; Bruno Gonçalves; Hao Hu; José J Ramasco; Vittoria Colizza; Alessandro Vespignani
Journal:  J Comput Sci       Date:  2010-08-01

7.  Epidemic models with heterogeneous mixing and treatment.

Authors:  Fred Brauer
Journal:  Bull Math Biol       Date:  2008-07-29       Impact factor: 1.758

8.  The role of routine versus random movements on the spread of disease in Great Britain.

Authors:  Leon Danon; Thomas House; Matt J Keeling
Journal:  Epidemics       Date:  2009-11-14       Impact factor: 4.396

  8 in total
  1 in total

1.  A straightforward edge centrality concept derived from generalizing degree and strength.

Authors:  Timo Bröhl; Klaus Lehnertz
Journal:  Sci Rep       Date:  2022-03-15       Impact factor: 4.379

  1 in total

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