| Literature DB >> 34307984 |
Christian Hanna1, Theodora A Potretzke2, Andrea G Cogal3, Yaman G Mkhaimer3, Peter J Tebben4, Vicente E Torres3, John C Lieske3,5, Peter C Harris3, David J Sas1,5, Dawn S Milliner1,3, Fouad T Chebib3.
Abstract
INTRODUCTION: Loss-of-function variants in the CYP24A1 gene cause a rare hereditary disease characterized by reduced 24-hydroxylase enzyme activity, increased serum 1,25-dihydroxycholecalciferol levels, hypercalcemia, hypercalciuria, and nephrocalcinosis and/or nephrolithiasis. Kidney cysts in patients with CYP24A1 deficiency were first reported in a single case study from our center. However, a possible association between CYP24A1 deficiency and kidney cysts has not been described.Entities:
Keywords: CYP24A1 deficiency; hypercalcemia; hypercalciuria; kidney cyst
Year: 2021 PMID: 34307984 PMCID: PMC8258502 DOI: 10.1016/j.ekir.2021.04.030
Source DB: PubMed Journal: Kidney Int Rep ISSN: 2468-0249
Clinical characteristics of genetically confirmed CYP24A1 deficiency cohort
| Clinical features | |
|---|---|
| 16 (6/10) | |
| Children, | 5 (31.3) |
| Reason for diagnosis, | |
| Family screening | 2 (12.5) |
| Clinical suspicion | 14 (87.5) |
| Age at first clinical presentation (yr) | |
| Mean (SD) | 22.4 (16.5) |
| Median (range) | 21 (0–59) |
| Clinical findings at presentation, | |
| Hypercalcemia of infancy | 2 (14.2) |
| Hypercalcemia | 2 (14.2) |
| Nephrolithiasis | 7 (50) |
| Nephrocalcinosis | 3 (21.4) |
| NL alone at diagnosis, | 5 (31.2) |
| NC alone at diagnosis, | 7 (43.8) |
| NL and NC at diagnosis, | 4 (25) |
| Age at confirmed pathogenic variants (yr) | |
| Mean (SD) | 32 (20.5) |
| Median (range) | 38 (1–66) |
| Variants type, | |
| Monoallelic | 4 (25) |
| Biallelic | 12 (75) |
| Age at last follow-up (yr) | |
| Mean (SD) | 34.1 (19.7) |
| Median (range) | 37 (7–67) |
| Age at first known kidney cyst(s) (yr) | |
| Mean (SD) | 30 (19) |
| Median (range) | 37 (3–60) |
| No. of total kidney cysts per patient | |
| Mean (SD) | 5.3 (8.6) |
| Median (range) | 2.5 (1–37) |
| No. of right kidney cysts | |
| Mean (SD) | 3.3 (5.8) |
| Median (range) | 2 (0–24) |
| No. of left kidney cysts | |
| Mean (SD) | 1.9 (3.1) |
| Median (range) | 1 (0–13) |
| No. of cysts ≥ 5 mm | |
| Mean (SD) | 2.8 (3.4) |
| Median (range) | 1.5 (0–14) |
| Family history of cystic kidney disease, | |
| No | 15 (93.8) |
| Yes | 0 (0) |
| Unknown | 1 (6.2) |
SD, standard deviation; NL, nephrolithiasis; NC, nephrocalcinosis.
Biochemical characteristics of genetically confirmed CYP24A1 deficiency cohorta
| Biochemical features | ||
|---|---|---|
| eGFR | 76.5 (30) | 0.01 |
| eGFR children, mean (SD) | 104.6 (32.1) | |
| eGFR adult, mean (SD) | 66.3 (22.9) | |
| Serum Ca (mg/dl), mean (SD) | 10.4 (1.1) | 0.04 |
| Children, mean (SD) | 12.1 (2.8) | |
| Adult, mean (SD) | 10.3 (0.5) | |
| Serum Pi (mg/dl), mean (SD) | 3.7 (0.7) | 0.11 |
| Children, mean (SD) | 4.1 (0.6) | |
| Adult, mean (SD) | 3.5 (0.7) | |
| iPTH (pg/dl), mean (SD) | 20.2 (15.1) | 0.16 |
| Children, mean (SD) | 11 (5) | |
| Adult, mean (SD) | 21.9 (16.2) | |
| 1,25(OH)2D3 (pg/dl), mean (SD) | 71.7 (23) | 0.01 |
| Children, mean (SD) | 92 (23.3) | |
| Adult, mean (SD) | 63 (16.9) | |
| 25(OH)D3 (ng/dl), mean (SD) | 51.3 (18.4) | 0.7 |
| Children, mean (SD) | 48.8 (27.6) | |
| Adult, mean (SD) | 52.6 (13.6) | |
| 25(OH)D/24,25(OH)2D, mean (SD) | 249.6 (153.4) | 0.04 |
| Children, mean (SD) | 357.6 (92.9) | |
| Adult, mean (SD) | 195.6 (154.2) | |
| 24-h urine Ca (mg/d), adult | ||
| Mean (SD) | 292.5 (148.9) | |
| Median (range) | 263 (67–585) | |
| Urinary Ca/Cr (mg/mg), children | ||
| Mean (SD) | 0.38 (0.23) | |
| Median (range) | 0.36 (0.14–0.7) | |
Ca/Cr, calcium-to-creatinine ratio; eGFR, estimated glomerular filtration rate; iPTH, intact parathyroid hormone; Pi, inorganic phosphorus; 1,25(OH)2D3, 1,25-dihydroxyvitaminD; 25(OH)D3, 25-hydroxyvitamin D; 25(OH)D/24,25(OH)2D, 25-hydroxyvitamin D to 24,25-dihydroxyvitamin D ratio.
Biochemical data obtained at the time of CYP24A1 deficiency evaluation.
CYP24A1 gene pathogenic variants identified in the cohort
| ID | Pedigree number | Allelism | Sequence alteration | Amino acid alteration |
|---|---|---|---|---|
| 1 | 1 | Monoallelic | c.732+1G>A | p.Thr244? |
| 2 | 1 | Monoallelic | c.845–2A>G | p.Val282? |
| 3 | 1 | Monoallelic | c.845–2A>G | p.Val282? |
| 4 | 2 | Biallelic | c.964G>A, c.1186C>T | p.Glu322Lys, p.Arg396Trp |
| 5 | 3 | Biallelic | c.667A>T, c.1226T>C | p.Arg223∗, p.Leu409Ser |
| 6 | 4 | Biallelic | c.428_430delAAG, c.1226T>C | p.Glu143del, p.Leu409Ser |
| 7 | 5 | Biallelic | c.1226T>C, c.1226T>C | p.Leu409Ser, p.Leu409Ser |
| 8 | 6 | Biallelic | c.999_1006del, c.1186C>T | p.Ser334Valfs9∗, p.Arg396Trp |
| 9 | 4 | Biallelic | c.428_430delAAG, c.1226T>C | p.Glu143del, p.Leu409Ser |
| 10 | 1 | Biallelic | c.732+1G>A, c.845–2A>G | p.Thr244?, p.Val282? |
| 11 | 7 | Monoallelic | c.62delC | p.Pro21Argfs |
| 12 | 8 | Biallelic | c.469C>T, c.469C>T | p.Arg157Trp; p.Arg157Trp |
| 13 | 9 | Biallelic | c.1186C>T, c.428_430delAAG | p.Arg396Trp, p.Glu143del |
| 14 | 10 | Biallelic | c.470G>A, c.469C>T | p. Arg157Gln, p.Arg157Trp |
| 15 | 11 | Biallelic | c.1186C>T, c.475C>T | p.Arg396Trp, p.Arg159Trp |
| 16 | 12 | Biallelic | c.1186C>T, c.475C>T | p.Arg396Trp, p.Arg159Trp |
Clinical features of CYP24A1 deficiency cohorta
| Case number | Age (yr) | Sex | Ethnicity | Age at clinical presentation (yr) | On Thiazide Diuretics/ Vit D | eGFR (ml/min/1.73 m2) | Serum Ca | Serum Pi | iPTH pg/dl | 25(OH)D3 ng/dl | 1,25(OH)2D3 | 25(OH)D/ 24,25(OH)2D | 24 h urine Ca mg/d | 24 h urine Ca mg/k/d | Urine Ca/Cr mg/mg |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 10 | F | W | 0 | no/no | >90 | 14.2 | 3.5 | <1 | 36 | 66 | 353 | >0.48 | ||
| 2 | 12 | M | W | 2 | no/no | 132 | 9.6 | 4.8 | 16 | 44 | 78 | 253 | 0.7 | ||
| 3 | 14 | F | W | 0 | no/no | 131 | 16.0 | 4.4 | 6 | 28 | 120 | 470 | 7.9 | 0.34 | |
| 4 | 13 | F | W | 4 | no/no | 88 | 10.5 | 4.6 | 11 | 39 | 83 | 430 | 0.36 | ||
| 5 | 16 | F | W | 13 | yes/no | 67.5 | 10.2 | 3.4 | <1 | 97 | 113 | 282 | 2.5 | 0.14 | |
| 6 | 40 | M | W | 36 | yes/no | 64 | 9.7 | 3.3 | 15 | 31 | 75 | 148 | 180 | ||
| 7 | 47 | M | W | 31 | no/no | 28 | 10.8 | 4.2 | 17 | 22 | 43 | 38 | 369 | ||
| 8 | 44 | F | W | 37 | no/yes | 94 | 10.8 | 3.4 | 15 | 47 | 81 | 336 | 263 | ||
| 9 | 45 | F | W | 34 | no/yes | 70 | 10.2 | 2.6 | 27 | 54 | 73 | 281 | 585 | ||
| 10 | 53 | M | W | 38 | no/no | 82 | 11.1 | 4.8 | 6 | 55 | 77 | 250 | 325 | ||
| 11 | 45 | M | W | 26 | yes/yes | 79 | 10.3 | 3.2 | 61 | 48 | 46 | 9 | 234 | ||
| 12 | 67 | F | W | 59 | yes/no | 75 | 9.3 | 3.4 | 43 | 34 | 73 | 47 | 509 | ||
| 13 | 66 | M | W | 19 | no/no | 50 | 10.6 | 3.5 | 14 | 69 | 70 | 460 | 207 | ||
| 14 | 27 | F | W | 18 | yes/yes | 100 | 9.9 | 2.6 | 19 | 54 | 67 | • | 210 | ||
| 15 | 52 | F | W | 18 | yes/no | 39 | 10.1 | 4.3 | 13 | 74 | 42 | 40 | 269 | ||
| 16 | 29 | F | W | 23 | no/yes | 48 | 10.1 | 3.3 | 11 | 60 | 40 | 347 | 67 |
eGFR, estimated glomerular filtration rate; PTHi, intact parathyroid hormone; W, white; 1,25(OH)2D3, 1,25-dihydroxyvitaminD; 25(OH)D3, 25-hydroxyvitamin D; 25(OH)D/24,25(OH)2D, 25-hydroxyvitamin D:24,25-dihydroxyvitamin D ratio.
Laboratory data obtained at the time of CYP24A1 deficiency evaluation.
Figure 1Box plots of key variables∗ in the genetically confirmed CYP24A1 deficiency cohort, including estimated glomerular filtration rate (eGFR), serum Ca, 25(OH)D3, 1,25(OH)2D3, intact PTH, and 25(OH)D/24,25(OH)2D. The central rectangle spans the first quartile to the third quartile. IQR, interquartile range. ∗Biochemical data obtained at the time of CYP24A1 deficiency evaluation.
Kidney cyst characteristics in the CYP24A1 deficiency cohort
| Case number | Age at first kidney cysts detection (yr) | Imaging modality | Age at imaging study (yr) | Total number of cysts | No. of R kidney cysts | Location of R kidney cysts | No. of L kidney cysts | Location of L kidney cysts | Smallest cyst | Largest cyst size, mm | No. of cysts ≥5 mm |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7 | US | 7 | 1 | 0 | n/a | 1 | CMJ | n/a | 2 | 0 |
| 2 | 7 | US | 10 | 1 | 0 | n/a | 1 | CMJ | n/a | 9 | 1 |
| 3 | 3 | US | 12 | 3 | 2 | M | 1 | n/a | 4 | 10 | 1 |
| 4 | 8 | US | 12 | 2 | 0 | n/a | 2 | M, CMJ | 13 | 21 | 2 |
| 5 | 14 | US | 15 | 3 | 2 | M | 1 | M | 6 | 8 | 3 |
| 6 | 36 | NCCT | 36 | 2 | 1 | M, CMJ | 1 | M, CMJ | 8 | 17 | 2 |
| 7 | 37 | NCCT | 37 | 10 | 6 | M | 4 | M | 3 | 30 | 6 |
| 8 | 38 | US | 38 | 3 | 2 | M, CMJ | 1 | M, CMJ | 5 | 13 | 3 |
| 9 | 40 | MRI | 40 | 8 | 5 | M | 3 | M | 2 | 15 | 4 |
| 10 | 41 | CECT | 43 | 37 | 24 | CMJ | 13 | CMJ | 2 | 13 | 14 |
| 11 | 44 | CECT | 44 | 6 | 3 | M, CMJ | 3 | M, CMJ | 2 | 14 | 4 |
| 12 | 59 | CECT | 59 | 1 | 1 | M | 0 | n/a | n/a | 12 | 1 |
| 13 | 60 | CECT | 60 | 4 | 3 | M | 1 | M | 2 | 8 | 1 |
| 14 | 18 | CECT | 18 | 3 | 2 | M | 1 | M | 8 | 23 | 3 |
| 15 | 50 | CECT | 50 | 1 | 1 | M | 0 | M | n/a | 5 | 1 |
| 16 | 24 | NCCT | 24 | 1 | 1 | M | 0 | n/a | n/a | 8 | 1 |
CECT, contrast-enhanced computed tomography; CMJ, renal corticomedullary junction; CTU, CT urogram; M, renal medulla; MRI, magnetic resonance imaging; n/a, not applicable; NCCT, noncontrast computed tomography; US, ultrasound.
Figure 2(a) Number of kidney cysts versus age in the genetically confirmed CYP24A1 deficiency cohort. (b) and (c) Box plots of key variables including largest cyst size in millimeters for each case, and number of cysts ≥5 mm in each case. (d) The number of cysts ≥5 mm in size in 55% (6 of 11) of adult patients with confirmed deficiency was above the 97.5th percentile of an age- and sex-matched control population. IQR, interquartile range.
Number of cysts (≥ 5mm in size; parapelvic cysts excluded) above the 97.5th percentile of an age- and sex-matched control adult population
| Age group, yr | Number of cysts ≥5 mm in both kidneys | |
|---|---|---|
| Men | Women | |
| 18–29 | ≥2 | ≥2 |
| 30–39 | ≥3 | ≥3 |
| 40–49 | ≥4 | ≥3 |
| 50–59 | ≥6 | ≥4 |
| 60–69 | ≥11 | ≥5 |
Adapted from Rule et al.
Figure 3Characteristic kidney cysts in representative CYP24A1 deficient patients by imaging modality. (a) Contrast-enhanced computed tomography. Bilateral simple cysts at cortico-medullary junction (orange arrows), right upper pole 14 mm and left upper pole 6 mm. Small nonobstructive left lower pole calculus (red arrow). (b) Magnetic resonance image. Bilateral simple medullary cysts (orange arrows) shown post-contrast as hypo-intense smoothly marginated nonenhancing lesions, right interpolar level each 3 mm and left upper pole 15 mm. (c) and (d) Ultrasound. Bilateral medullary and corticomedullary junction simple cysts (orange arrows) and medullary nephrocalcinosis.
Figure 4Kidney cyst number versus age measured from available serial kidney ultrasound imaging studies in patients with confirmed or suspected CYP24A1 deficiency during childhood period. This graph indicates that new cystogenesis (1 to 5 cysts) developed in all patients but 1 who had a short follow-up.