| Literature DB >> 34306216 |
Shijian Chen1,2, Wenjun Liu1,2, Chen Yang1,2, Xiujin Li1,2, Xu Shen1,2, Danli Jiang1,2, Yunmao Huang1,2, Yunbo Tian1,2.
Abstract
The mechanisms by which GnIH regulates the steroid synthesis pathway in duck granulosa cells remain poorly understood. In this study, we measured steroid hormone secretion by ELISA and reproduction-associated gene expression by quantitative real-time Polymerase Chain Reaction (qPCR) in duck granulosa cells treated with different concentrations of GnIH (0, 0.1, 1, 10, and 100 ng/mL) for 24 h. The genome-wide expression profiles of GnIH-treated cells (0 and 10 ng/mL) were evaluated by high-throughput RNA sequencing. Compared with untreated cells, the secretion of the steroid hormones E2, E1, P4, and T was downregulated, with that of E1 and P4 reaching statistical significance (P<0.05); in contrast, the secretion of ACV and INH was significantly upregulated (P<0.05) after treatment with 10 and 100 ng/mL GnIH. The expression of encoding steroidogenic proteins and enzymes genes (STAR, CYP11A1, CYP17A1, CYP19A1, and 3-β-HSD) and encoding gonadotropin receptors genes (FSHR, LHR) were significantly declined (P<0.05) in the 10 and 100 ng/mL GnIH treatments. Transcriptome sequencing identified 348 differentially expressed genes (DEGs), including 253 upregulated and 95 downregulated genes. The DEGs were mainly involved in cell growth and death, immune response, and steroid biosynthesis pathways. We identified four novel DEGs (MROH5, LOC113840576, SDR42E1, and LOC113841457) with key roles in the regulation of steroid hormone biosynthesis. Our study revealed changes in gonadal steroid hormone secretion and steroid biosynthesis pathway-related gene expression in duck granulosa cells under the inhibitory effect of GnIH. These data contribute to our understanding of the molecular and genetic mechanisms underlying reproduction in ducks.Entities:
Keywords: Gonadotropin-inhibitory hormone (GnIH); gene expression; granulosa cell; reproduction; steroid synthesis
Year: 2021 PMID: 34306216 PMCID: PMC8291778 DOI: 10.1590/1984-3143-AR2021-0036
Source DB: PubMed Journal: Anim Reprod ISSN: 1806-9614 Impact factor: 1.807
qPCR primer sequences.
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| F:GCTGATGCTCCCATGTTCGTGAT | XM_027449739.1 |
| R:GTGGTGCAAGAGGCATTGCTGAC | ||
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| F: AGTGTTGAATGTACTCGCCT | XM_021267212.2 |
| R: TGTCTGTTCTGTAAATCTGG | ||
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| F: GCTCTGTGATAACTTGCGTA | EU049613.1 |
| R: TGAGGTTTCTGTTGTCCTTC | ||
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| F: CTGCCATCTCCTACCGCCAC | XM_027443533.1 |
| R: CTGCTCCACCACCACCTCCA | ||
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| F: ACAGGGAGAAGTTGGGTGTC | KY463321.1 |
| R: GTAGGGCTTGTTGCGGTAGT | ||
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| F: GTCGCCCTGGAGAAGATCAT | NM_001001901.2 |
| R: TCGGTAGGAGGAGTTGAAGC | ||
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| F: AGAAGTGACAGGCCCAAACT | KC310447.1 |
| R: ACATGGATCTCAGGGCACAA | ||
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| F: GGATGGGAGTAGGTAATGCC | KY762997.1 |
| R: ACAAGACCAGGACCAGACAG | ||
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| F: CATCCTGGTGTGCTTCATCG | KC514473.1 |
| R: ACATGGTGTTGTCAAAGGGC |
Figure 1Effect of GnIH treatment on E2, E1, P4, T, ACV, and INH secretion levels. Values were expressed as means ± SEM. Different lowercase letters indicate significant difference (P<0.05); The inclusion of the same lowercase letters indicate no significant difference (P>0.05).
Figure 2Effect of GnIH treatment on the expression of reproduction related genes. Gene expression was determined by qPCR. The results were normalized based on the GAPDH housekeeping gene. All values were expressed as the mean ± SEM. Different lowercase letters indicate significant difference (P<0.05); The inclusion of the same lowercase letters indicate no significant difference (P>0.05).
Clean reads statistics.
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| S1-1 | 52615692 | 78.21% | 71.62% | 98.24 | 94.26 |
| S1-2 | 50247302 | 78.49% | 72.07% | 98.03 | 93.71 |
| S1-3 | 43186154 | 80.51% | 74.07% | 98.13 | 93.93 |
| S2-1 | 36420012 | 77.04% | 69.58% | 97.92 | 93.49 |
| S2-2 | 48833142 | 77.71% | 70.90% | 97.9 | 93.45 |
Figure 3Principal component analysis scatterplot of samples.
Figure 4Volcano plot of DEGs in duck granulosa cells. Each dot represents a gene. Red dots indicate upregulated genes, and blue dots indicate downregulated genes. Grey dots indicate genes that were not differentially expressed.
The top 10 upregulated genes in granulosa cells.
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| XM_005026649.4 |
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| XM_027468454.1 |
| A nuclear protein that functions as a transcriptional regulator |
| XM_027471381.1 |
| Encodes a mitochondrial flavoprotein, initiates electron transport for cytochrome P450, receives electrons from NADPH |
| NM_001310420.1 |
| A major mediator of the inflammatory response |
| NM_001310803.1 |
| Encodes an intestinal hydrogen peptide cotransporter and is important for the uptake and digestion of dietary proteins |
| XM_027454493.1 |
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| NM_001310386.1 |
| Encodes an integral membrane protein, maintains an essential electrochemical gradient |
| XM_027449142.1 |
| Encodes chloride intracellular channel family of proteins |
| XM_027462893.1 |
| An auxiliary protein of the large-conductance, voltage- and calcium-activated potassium channel |
| XM_027446434.1 |
| Plays a role in growth suppression, blocks entry into S phase, and prevents cell cycling |
The top 10 downregulated genes in granulosa cells.
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| XM_005019040.4 |
| Related to glycosaminoglycan metabolism and metabolism |
| XM_027451936.1 |
| Related to nanoparticle effects and cell junction organisation |
| XM_027461168.1 |
| Related to validated targets of C-MYC transcriptional activation |
| XM_027448834.1 |
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| XM_027459472.1 |
| Related to the Wnt signalling pathway and Pluripotency |
| XM_027453339.1 |
| Acts as an angiogenesis inhibitor |
| XM_027457011.1 |
| Related to Wnt signalling pathways: CDK-mediated phosphorylation and removal of Cdc6 |
| XM_021276453.2 |
| Related to binding and actin binding |
| XM_027447614.1 |
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| XM_027468631.1 |
| Related to signaling by GPCRs and Signalling by Rho GTPases |
Figure 5Histogram of Gene Ontology (GO) Terms. Different colors were used to distinguish biological process (BP), cellular component (CC), and molecular function (MF). Blue represents MF, green represents CC, and orange represents BP.
Figure 6Histogram of enriched GO Terms for DEGs. The orange represents upregulated genes, and green represents downregulated genes. The x-axis and y-axis indicate the enriched GO Terms and the number of DEGs, respectively.
Figure 7Scatter plot of enriched pathways for DEGs in granulosa cells. The x-axis and y-axis indicate the rich factor and pathway entry, respectively. The size of the dots indicates the number of significant DEGs; larger dots correspond to a greater number of significant DEGs. Different colored points represent different Q-values.
Figure 8qPCR validation of key DEGs in granulosa cells. Gene expression levels were assessed by qPCR and were presented relative to GAPDH expression. Statistical significance was assessed by t-test. Different lowercase letters indicate significant difference (P<0.05).
Figure 9Protein–protein interaction (PPI) network of eight DEGs based on the STRING database.