| Literature DB >> 34305655 |
Richa Aishwarya1, Chowdhury S Abdullah2, Mahboob Morshed2, Naznin Sultana Remex1, Md Shenuarin Bhuiyan1,2.
Abstract
The Sigma 1 receptor (Sigmar1) is a ubiquitously expressed multifunctional inter-organelle signaling chaperone protein playing a diverse role in cellular survival. Recessive mutation in Sigmar1 have been identified as a causative gene for neuronal and neuromuscular disorder. Since the discovery over 40 years ago, Sigmar1 has been shown to contribute to numerous cellular functions, including ion channel regulation, protein quality control, endoplasmic reticulum-mitochondrial communication, lipid metabolism, mitochondrial function, autophagy activation, and involved in cellular survival. Alterations in Sigmar1's subcellular localization, expression, and signaling has been implicated in the progression of a wide range of diseases, such as neurodegenerative diseases, ischemic brain injury, cardiovascular diseases, diabetic retinopathy, cancer, and drug addiction. The goal of this review is to summarize the current knowledge of Sigmar1 biology focusing the recent discoveries on Sigmar1's molecular, cellular, pathophysiological, and biological functions.Entities:
Keywords: Sigmar1; biological function; cellular function; molecular structure; physiological function
Year: 2021 PMID: 34305655 PMCID: PMC8293995 DOI: 10.3389/fphys.2021.705575
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
FIGURE 1Molecular characterization of Sigmar1. (A) Schematic diagram representing the genetic structure of the SIGMAR1 gene, including the exon and, intron lengths in terms of nucleotides and amino acids. (B) Simplified schematic of full-length Sigmar1 topology showing the first predicted one transmembrane (TM) structure with a TM domain-containing amino acid (aa) residues from 92 to 112, MPWAVGRR as the ER retention site, and regions important for ligand binding (exon 3 and Ser99-Leu106). (C) Simplified schematic of the full-length Sigmar1 topology showing the second predicted two TM structures with two TM domains (TM1 containing aa residues 11 to 31 and TM2 containing 81 to 101) and an extracellular loop (containing 50aa). Both N- and C- terminal of the protein are on the same side. (D) Simplified schematic for the recent crystal structure of full-length Sigmar1 suggesting the trimeric structure of the protein with trimerization of three single transmembrane domains and each transmembrane domain being tightly associated with one promoter. The C-terminal is located on the cytosolic side. (E) Schematic diagram representing full protein structure of Sigmar1 with structural details for receptor dimerization, ligand binding, cholesterol-, cocaine-, progesterone- binding.
FIGURE 2Subcellular localization of Sigmar1. Cartoon showing a summary of the sub-cellular localization of Sigmar1 as evidenced by several studies using various cell types. Overall, the presence of Sigmar1 has been detected on the mitochondria-associated ER membrane (MAM), plasma membrane, ER membrane, nuclear membrane, mitochondria-associated ER membrane, mitochondrial membrane, nucleoplasmic reticulum and sub-surface cisternae in different cell types including CHO cells, human B and T cells, photoreceptor cells, and neuronal cell lines including NSC34 cells and neuro2a cells.
Major studies on identifying Sigmar1’s subcellular organelle localization (in chronological order).
| Mitochondria Microsomal Synaptosomal fractions | Western blotting on subcellular fractions | Rat brain | Anti-Sigmar1 Rabbit Polyclonal antibody raised against synthetic amino acid residues 143–163 of Sigmar1 (produced by authors) | Not listed | |
| Plasma membrane Mitochondrial membranes Vesicles or elongated cisternae of ER | Immunoelectron microscopy | Adult rat brain hypothalamus and hippocampus sections | Anti-Sigmar1 Rabbit Polyclonal IgG raised against synthetic peptide of Sigmar1 amino acid sequence 143–162 (produced by authors) | Antibody specificity confirmed through absence of staining in brain tissue sections when co-incubated with Sigmar1 specific antigen | |
| Perinuclear areas Plasmalemmal regions of cell-cell contact Growth cones of neurites | Fluorescence microscopy of co-immunocytohistochemistry and co-immunoprecipitation of endogenous Sigmar1 with Ankyrin B and IP3R3 receptors | Mouse neuroblastoma x rat glioma hybrid NG-108-15 cells | Anti-Sigmar1 Rabbit antibody raised against N-terminal residues of mouse Sigmar1 (produced by authors) | Not listed | |
| Mitochondrial membranes | i. Radioisotope labeled Sigmar1 agonist [3H](+)-pentazocine binding assay ii. Immunofluorescence | i. Isolated rat liver mitochondria ii. Rat liver sections | Anti-Sigmar1 Rabbit Polyclonal IgG ( | Validated by original contributors at ( | |
| Plasma membranes | i. Exogenous expression of N-terminal and C-terminal GFP tagged Sigmar1 constructs and fluorescence microscopy ii. Co-immunoprecipitation with anti-Kv1.4 antibody | i. | Anti-Sigmar1 Rabbit Polyclonal IgG ( | Not listed | |
| i. ER associated detergent insoluble lipid droplets/microdomains ii. Sigmar1 immunostained reticular structure was noted negative for endosomes (EEA-1), mitochondria (Mitotracker, bcl-2), lysosomes (Lyso Tracker, LAMP-1), synaptic vesicles (Synapsin II), plasma membrane (Fas and CTx-B), golgi (GM130), ER-associated proteins | Fluorescence microscopy; cells were specially treated with 0.02% SDS for 10 min | NG-108 cells ( | i. Exogenously expressed C-terminal Enhanced Yellow Fluorescent Protein (EYFP)-tagged mouse Sigmar1 construct ii. Polyclonal rabbit anti-guinea pig Sigmar1 antibody raised against guinea pig Sigmar1 amino acid sequence 144–165 ( | i. Exogenous overexpression ii. Anti-Sigmar1 staining pattern have been visually compared to expression pattern of exogenously expressed Sigmar1-EYFP plasmid construct ( | |
| Mitochondria Mitochondria-associated ER membranes (MAM) Nuclear and microsomal fractions | i. Immunofluorescence staining of endogenous Sigmar1 in cells transfected with Mitochondria and ER fluorescent constructs, ii. Western blot analysis on ultracentrifugation based subcellular fractionations | Chinese hamster ovary (CHO) cells | Anti-Sigmar1 Rabbit antibodies raised against amino acid residues 52–69 and 143–165 of Rat Sigmar1 (produced by authors) | Western blot on CHO cell lysates and on different rat organs | |
| Focal adhesion contacts (FACs) | Co-localization of Sigmar1 with FAC protein Talin in immunofluorescence staining | CHO-K1 cells | Anti-Sigmar1 Rabbit antibody raised against Maltose Binding Protein (MBP)-Guinea Pig full length Sigmar1 fusion protein ( | Western blot analysis using guinea pig Sigmar1 overexpressing COS-7 cells as positive control ( | |
| i. Motor neurons of mouse brain Medulla and spinal cord ii. Cholinergic post-synaptic terminals co-localized to Kv2.1 potassium channels iii. Putative subsurface ER cisternae close to plasma membrane | i. Immunohistochemistry ii. Co-immunofluorescence with cholinergic neuron markers iii. Immuno-electron microscopy | Mouse brain and spinal cord sections | Anti-Sigmar1 Rabbit antibody raised against Maltose Binding Protein (MBP)-Guinea Pig full length Sigmar1 fusion protein ( | Sigmar1 knockout mice brain sections as negative control in immunohistochemistry | |
| Mitochondria ER | Fluorescence microscopy | Mouse neuroblastoma Neuro-2a cells | Exogenously expressed eGFP and mCherry tagged Sigmar1’s correlative, visual colocalization observation with erRFP and mtGFP labeled ER and mitochondria, respectively | Exogenous overexpression | |
| Mitochondria and MAM fractions | Western blot analysis on subcellular fractions | Chinese hamster ovary (CHO) cells | Anti-Sigmar1 Rabbit antibodies raised against Rat Sigmar1 ( | Western blot on CHO cell lysates and on different rat organs ( | |
| ER and Nuclear Envelope | Confocal immunofluorescence staining | NG108 and Neuro-2a cells | Anti-Sigmar1 (Santa Cruz Biotechnology) | Commercial vendor | |
| Predominantly in nuclear envelope, sparsely at ER cisternae located subsurface of plasma membranes | Immuno-electron microscopy | Mouse retinal photoreceptor cells | Anti-Sigmar1 Rabbit antibody raised against Maltose Binding Protein (MBP)-Guinea Pig full length Sigmar1 fusion protein ( | Reported at ( | |
| Plasma membrane ER Nuclear envelope | Immuno-electron microscopy | Mouse and rat dorsal root ganglion (DRG) cells | Anti-Sigmar1 Rabbit antibody raised against Maltose Binding Protein (MBP)-Guinea Pig full length Sigmar1 fusion protein ( | Validated through absence of immunofluorescence staining using Sigmar1 knockout mouse DRG tissue | |
| Nucleus Nucleoplasmic reticulum Plasma membrane subsurface ER cisternae | Immuno-electron microscopy | NSC34 cells (produced by fusion of motor neuron enriched, embryonic mouse spinal cord cells with mouse neuroblastoma), Sigmar1-null NSC34 cells | Endogenous Sigmar1 stained with antibody as reported in | Reported at ( | |
| i. ER, Mitochondria associated ER membranes (MAM) ii. Cholesterol-containing giant unilamellar vesicles (GUVs) | Immuno-fluorescence microscopy | HEK293T cells | i. Exogenously expressed GFP-tagged human Sigmar1 colocalization assessed with mCherry tagged Sec16β protein and immunofluorescence staining of mitochondrial outer membrane protein Tom20 ii. GFP-tagged Sigmar1 fusion constructs | i. and ii. Exogenous overexpression of GFP-tagged fusion constructs |
Genetic and clinical features of patients with SIGMAR1 mutations.
| c.505T > A/.622C > T | p.T169R/p.R208W | Japanese | ALS | 80y | + | Brisk | Present | Normal | |
| c.283dupC | p.L95Pfs*29 | Hispanic | Juvenile ALS | 5y | + | Brisk | Present | Normal | |
| c.304G > | p.E102Q | Saudi | Juvenile ALS | 1–2y | + | Brisk | N/A | Normal | |
| *c.58T > C | 3′-UTR | Korean | Sporadic ALS | 55y | + | N/A | N/A | N/A | |
| *31A > G | 3’-UTR | Pakistani | Juvenile ALS | 30–36yrs | + | Brisk | N/A | Normal | |
| c.412G > A | p.E138K | Italian | HMN | 10—18y | + | Brisk | N/A | Mild cerebral atrophy | |
| c.247T > C/c.545T > C | p.F83L/p.L182P | German/French | HMN | 34y | + | Brisk | Present | Normal | |
| c.412G > | p.E138Q | Italian | HMN | 9–12y | + | Brisk | Present | Normal | |
| c.448G > | p.E150K | Italian | HMN | Infancy | + | Brisk | Present | Normal | |
| c.238C > | p.Q80* | Omani | dHMN | 1–11y | + | Brisk | Present | Normal | |
| c.500A > | p.N167I | Jordanian | dHMN | 6–10y | + | Brisk | Present | Normal | |
| c.561_576del | p.D188Pfs*69 | Portuguese | dHMN | 4y | + | Absent | N/A | Normal | |
| *51G > T | 3′-UTR | Australian | FTLD | No info | No info | No info | No info | No info | |
| *26C > T | 3′-UTR | Australian | FTLD | No info | No info | No info | No info | No info | |
| *47G > A | 3′-UTR | Polish | FTLD | No info | No info | No info | No info | No info | |
| c.194T > | p.L65Q | French/British | Silver-like syndrome | 3y | + | Brisk | Present | Normal |
FIGURE 3Localization of neuropathy-related mutations in the SIGMAR1 gene. Schematic diagram representing the genetic structure of the SIGMAR1 gene showing the locations of all the mutations related to skeletal muscle pathology.
FIGURE 4Summary of the pathophysiological functions of Sigmar1. Schematic showing an overall summary of the role of Sigmar1 in the pathophysiology related to different organs as present in the current literature. Briefly, agonist-mediated activation of Sigmar1 has protective effects in pathological conditions of several organs including heart (cardiac hypertrophy, myocardial infarction, atrial fibrillation, vascular disease, drug-induced cardiomyopathy and maladaptive ER stress), brain (neurodegenerative diseases including AD, HD and PD (with the exception of MPTP-induced PD) and ischemic brain injuries), kidneys, retina, liver, and the immune system. Inhibition of Sigmar1 using its antagonists is reported to be protective in several pathologies including cancer, cocaine addiction, and COVID-19. However, due to conflicting reports on whether activation or inhibition of Sigmar1 is protective, the field remains inconclusive about the effects of Sigmar1 on methamphetamine and alcohol addiction.
FIGURE 5Biological functions of Sigmar1. Schematic diagram summarizing the functions of Sigmar1 including its involvement in cognition, memory, ER stress, mitochondrial dynamics, mitochondrial respiration and function, autophagy, lipid transport from ER, and ion channel regulation.
Sigmar1 dependent regulation of ion channels through protein-protein interaction.
| Inositol tri-phosphate receptor (IP3R) | NG-108, CHO, bovine brain mitochondria | Co-IP | Native Sigmar1 and Sigmar1-EGFP | Native IP3R3 | Native expression and transient expression | |
| NG-108 | Co-IP and PLA | Native Sigmar1 | Native IP3R1 | Native expression | ||
| Rat heart tissue | Co-IP | Native Sigmar1 | Native IP3R2 | Native expression | ||
| Ryanodine receptor | Rat heart tissue | Co-IP | Native Sigmar1 | Native RYR2 | Native expression | |
| L-ype Voltage-gated calcium channel (VGCC) | RGC-5 cells | Co-IP | Wild-type Sigmar1 | Native L-type VGCC | Stable and native expression | |
| Voltage-dependent N-type calcium channel (Cav2.2) | HEK293T | FRET and Co-IP | Sigmar1-dsred | EGFP-Cav2.2 | Transient overexpression | |
| Calcium release-activated calcium channel | tSA-201 | Co-IP | Sigmar1-FLAG | ORAI-Myc | Transient overexpression | |
| Voltage-dependent potassium channel | Mouse nucleus accumbens lysate, NG108-15 | Co-IP and Co-IP with cross-linking | Native Sigmar1 and Sigmar1-V5-His | Native Kv1.2, wild-type Kv1.2 | Native expression and transient expression | |
| HEK293 | Co-IP | Sigmar1-FLAG | Kv1.3-HA | Transient expression | ||
| Rat posterior pituitary lysate | Co-IP | Native Sigmar1 | Native Kv1.4 | Native expression | ||
| SK3 channel | SKmel28 cells, HEK293 | Co-IP and HTRF | Sigmar1-Myc, HALO-Sigmar1-Myc | Wild-type SK3, SK3-HA | Transient and stable overexpression | |
| Nav1.5 Na+ channel | tSA201, MDA-MB-468, MDA-MB-231 | Anti-FLAG chromatography, PLA, Co-IP | Sigmar1-FLAG, Native Sigmar1 | Nav1.5-HA, Native Nav1.5 | Transient overexpression, native expression | |
| Voltage-dependent anion channel 2 (VDAC2) | MA-10 | Co-IP | Native Sigmar1 | Native VDAC2 | Native expression | |
| Acid sensing ion channel 1a (ASIC1a) | HEK293 | Ni affinity chromatography | Sigmar1-FLAG-His | ASIC1a-His | Stable overexpression (ASIC1a) and transient overexpression (Sigmar1) |
Most common Sigmar1 ligands cited in this manuscript with their respective affinities and selectivity.
| PRE-084 | Sigmar1 (Ki 44–53 nM) > Sigmar2 (Ki 32.1 μM) ( | Agonist ( | − | Low binding affinity for dopamine D2, muscarinic acetylcholine, serotonin, and adrenergic receptors ( | − |
| SA4503 (cutamesine) | Sigmar1 (Ki 4.6 nM) > Sigmar2 (Ki 63.1 nM) ( | Agonist ( | − | Little affinity for 36 other receptors, ion channels and second messenger systems ( | − |
| (+) Pentazocine | Sigmar1 (Ki 3.9–23.3 nM) > Sigmar2 (Ki 1,542–6,611 nM) ( | Agonist ( | Binds at low affinity ( | k-opioid receptor-partial agonist (analgesic), enhances acetylcholine release ( | − |
| ANAVEX 2-73 (blarcamesine) | Moderate Sigmar1 (Ki 860 nM) ( | Agonist ( | − | Muscarinic acetylcholine receptor-inhibitor ( | − |
| (+)-SKF-10047 | Sigmar1 (Ki 54–597 nM) > Sigmar2 (Ki 11.17–39.74 μM) ( | Agonist ( | − | NMDA receptor antagonist, enhances acetylcholine release ( | Inhibits Nav channels in Sigmar1 knockout cells ( |
| Fluvoxamine | Sigmar1 (Ki 36 nM) > Sigmar2 (Ki 8,439 nM) ( | Agonist ( | − | Serotonin reuptake inhibitor ( | − |
| DTG | Sigmar1 (Ki 38–203 nM) =Sigmar2 (Ki13–58 nM) ( | Agonist ( | Agonist ( | − | Inhibits Nav channels in Sigmar1 knockout cells ( |
| DHEA | Moderate Sigmar1 (Ki 2.96 μM) ( | Agonist ( | − | Neurosteroid, NMDA receptors, GABA-A receptors, nuclear receptor ( | − |
| Cocaine | Sigmar1 (Ki 2.5–19 μM) > Sigmar2 (Ki 31 μM) ( | Agonist ( | − | Dopamine transporters, Neurotransmitter reuptake blocker ( | − |
| 4-IBP | Sigmar1 (Ki 1.70 nM) > Sigmar2 (Ki 25.2 nM) ( | Agonist ( | Antagonist ( | − | Inhibits Ca2+ entry and block TRPCs and TRPMs in the absence of Sigmar1 ( |
| PPBP | Sigmar1 (Ki 0.8 nM) = Sigmar2 (Ki 1.14 nM) ( | Agonist ( | − | nNOS inhibitor ( | − |
| Fabomotizole (Afobazole) | Moderate Sigmar1 (Ki 5.9 μM) ( | Agonist ( | Agonist ( | Melatonin receptors (MT1 and MT3), MAO-A receptive site ( | − |
| Sigmar1 (Ki 57 nM) > Sigmar2 (Ki 5,450 nM) ( | Agonist ( | Binds at comparatively lower affinity ( | adrenergic-α2C, Dopamine D2 and D3 receptors, serotoninergic-5HT1A ( | − | |
| Haloperidol | Sigmar1 (Ki 1–40 nM) Sigmar2 (Ki 12–221 nM) ( | Antagonist ( | Antagonist ( | Dopamine (D2 and D3) receptor antagonist ( | − |
| Sertraline | Sigmar1 (Ki 57 nM) > Sigmar2 (Ki 5,297 nM) ( | Antagonist ( | − | Serotonin reuptake inhibitor ( | − |
| PB28 | Sigmar2 (Ki 0.28 nM) > Sigmar1 (Ki 10 nM) ( | Antagonist (low affinity) ( | Agonist ( | − | Inhibits Nav channels, and Kv2.1 current in the absence of Sigmar1 ( |
| NE-100 | Sigmar1 (Ki 1.5 nM) > Sigmar2 (Ki 84.6 nM) ( | Antagonist ( | Inhibits Kv2.1 current in the absence of Sigmar1 ( | ||
| E-5842 | Sigmar1 (Ki 4 nM) > Sigmar2 (Ki 220 nM) ( | Antagonist ( | − | Dopamine receptors, serotonin receptors, acetylcholine and muscarinic receptors, adrenergic receptors ( | Induces micronucleated polychromatic erythrocyte-dependent hypothermia in Sigmar1 null mice ( |
| BD1047 | Sigmar1 (Ki 0.6–5.3 nM) > Sigmar2 (Ki 47 nM) ( | Antagonist ( | Binds with 10 times lower affinity ( | Beta adrenergic receptor ligand ( | Inhibits Ca2+ entry and block TRP channels, and Kv2.1 current in the absence of Sigmar1 ( |
| BD1063 | Sigmar1 (Ki 47 nM) > Sigmar2 (Ki 449 nM) ( | Antagonist ( | − | − | Inhibits Ca2+ entry and block TRP channels in the absence of Sigmar1 ( |
| SM21 | − | − | Antagonist ( | − | Inhibits Kv2.1 current in the absence of Sigmar1 ( |
| Methamphetamine | − | Antagonist ( | − | Dopamine Transporters, Monoamine transporters ( | − |
| IPAG | Sigmar1 (Ki 3 nM) > Sigmar2 (Ki 500–8000 nM) ( | Antagonist ( | − | − | − |