Literature DB >> 34305159

The Structure of Natural Biogenic Iron (Oxyhydr)oxides Formed in Circumneutral pH Environments.

Andrew H Whitaker1, Robert E Austin1, Kathryn L Holden1, Jacob L Jones2, F Marc Michel3, Derek Peak4, Aaron Thompson5, Owen W Duckworth1.   

Abstract

Biogenic iron (Fe) (oxyhydr)oxides (BIOS) partially control the cycling of organic matter, nutrients, and pollutants in soils and water via sorption and redox reactions. Although recent studies have shown that the structure of BIOS resembles that of two-line ferrihydrite (2LFh), we lack detailed knowledge of the BIOS local coordination environment and structure required to understand the drivers of BIOS reactivity in redox active environments. Therefore, we used a combination of microscopy, scattering, and spectroscopic methods to elucidate the structure of BIOS sampled from a groundwater seep in North Carolina and compare them to 2LFh. We also simulated the effects of wet-dry cycles by varying sample preparation (e.g., freezing, flash freezing with freeze drying, freezing with freeze drying and oven drying). In general, the results show that both the long- and short-range ordering in BIOS are structurally distinct and notably more disordered than 2LFh. Our structure analysis, which utilized Fe K-edge X-ray absorption spectroscopy, Mössbauer spectroscopy, X-ray diffraction, and pair distribution function analyses, showed that the BIOS samples were more poorly ordered than 2LFh and intimately mixed with organic matter. Furthermore, pair distribution function analyses resulted in coherent scattering domains for the BIOS samples ranging from 12-18 Å, smaller than those of 2LFh (21-27 Å), consistent with reduced ordering. Additionally, Fe L-edge XAS indicated that the local coordination environment of 2LFh samples consisted of minor amounts of tetrahedral Fe(III), whereas BIOS were dominated by octahedral Fe(III), consistent with depletion of the sites due to small domain size and incorporation of impurities (e.g., organic C, Al, Si, P). Within sample sets, the frozen freeze dried and oven dried sample preparation increased the crystallinity of the 2LFh samples when compared to the frozen treatment, whereas the BIOS samples remained more poorly crystalline under all sample preparations. This research shows that BIOS formed in circumneutral pH waters are poorly ordered and more environmentally stable than 2LFh.

Entities:  

Year:  2021        PMID: 34305159      PMCID: PMC8294128          DOI: 10.1016/j.gca.2021.05.059

Source DB:  PubMed          Journal:  Geochim Cosmochim Acta        ISSN: 0016-7037            Impact factor:   5.921


  45 in total

1.  Some observations on the occurrence of the iron bacterium Leptothrix ochracea in fresh water, including reference to large experimental enclosures.

Authors:  J G Jones
Journal:  J Appl Bacteriol       Date:  1975-08

2.  Nanoparticles: strained and stiff.

Authors:  Benjamin Gilbert; Feng Huang; Hengzhong Zhang; Glenn A Waychunas; Jillian F Banfield
Journal:  Science       Date:  2004-07-01       Impact factor: 47.728

3.  Direct observation of tetrahedrally coordinated Fe(III) in ferrihydrite.

Authors:  Derek Peak; Tom Regier
Journal:  Environ Sci Technol       Date:  2012-03-09       Impact factor: 9.028

4.  Iron and arsenic speciation and distribution in organic flocs from streambeds of an arsenic-enriched peatland.

Authors:  Laurel K ThomasArrigo; Christian Mikutta; James Byrne; Kurt Barmettler; Andreas Kappler; Ruben Kretzschmar
Journal:  Environ Sci Technol       Date:  2014-10-27       Impact factor: 9.028

5.  Rapid Iron Reduction Rates Are Stimulated by High-Amplitude Redox Fluctuations in a Tropical Forest Soil.

Authors:  Brian Ginn; Christof Meile; Jared Wilmoth; Yuanzhi Tang; Aaron Thompson
Journal:  Environ Sci Technol       Date:  2017-02-28       Impact factor: 9.028

6.  Cr(vi) uptake and reduction by biogenic iron (oxyhydr)oxides.

Authors:  Andrew H Whitaker; Jasquelin Peña; Mathilde Amor; Owen W Duckworth
Journal:  Environ Sci Process Impacts       Date:  2018-07-18       Impact factor: 4.238

7.  Life at the energetic edge: kinetics of circumneutral iron oxidation by lithotrophic iron-oxidizing bacteria isolated from the wetland-plant rhizosphere.

Authors:  Scott C Neubauer; David Emerson; J Patrick Megonigal
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

8.  Preliminary characterization and biological reduction of putative biogenic iron oxides (BIOS) from the Tonga-Kermadec Arc, southwest Pacific Ocean.

Authors:  S Langley; P Igric; Y Takahashi; Y Sakai; D Fortin; M D Hannington; U Schwarz-Schampera
Journal:  Geobiology       Date:  2009-01       Impact factor: 4.407

9.  Influence of pO2 on Iron Redox Cycling and Anaerobic Organic Carbon Mineralization in a Humid Tropical Forest Soil.

Authors:  Chunmei Chen; Christof Meile; Jared Wilmoth; Diego Barcellos; Aaron Thompson
Journal:  Environ Sci Technol       Date:  2018-07-03       Impact factor: 9.028

10.  The Microbial Ferrous Wheel in a Neutral pH Groundwater Seep.

Authors:  Eric E Roden; Joyce M McBeth; Marco Blöthe; Elizabeth M Percak-Dennett; Emily J Fleming; Rebecca R Holyoke; George W Luther; David Emerson; Juergen Schieber
Journal:  Front Microbiol       Date:  2012-05-22       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.