Literature DB >> 34304633

Role of long interspersed nuclear element-1 in the regulation of chromatin landscapes and genome dynamics.

Kenneth S Ramos1, Pasano Bojang2, Emma Bowers1.   

Abstract

LINE-1 retrotransposon, the most active mobile element of the human genome, is subject to tight regulatory control. Stressful environments and disease modify the recruitment of regulatory proteins leading to unregulated activation of LINE-1. The activation of LINE-1 influences genome dynamics through altered chromatin landscapes, insertion mutations, deletions, and modulation of cellular plasticity. To date, LINE-1 retrotransposition has been linked to various cancer types and may in fact underwrite the genetic basis of various other forms of chronic human illness. The occurrence of LINE-1 polymorphisms in the human population may define inter-individual differences in susceptibility to disease. This review is written in honor of Dr Peter Stambrook, a friend and colleague who carried out highly impactful cancer research over many years of professional practice. Dr Stambrook devoted considerable energy to helping others live up to their full potential and to navigate the complexities of professional life. He was an inspirational leader, a strong advocate, a kind mentor, a vocal supporter and cheerleader, and yes, a hard critic and tough friend when needed. His passionate stand on issues, his witty sense of humor, and his love for humanity have left a huge mark in our lives. We hope that that the knowledge summarized here will advance our understanding of the role of LINE-1 in cancer biology and expedite the development of innovative cancer diagnostics and treatments in the ways that Dr Stambrook himself had so passionately envisioned.

Entities:  

Keywords:  Chromatin landscapes; L1 mobilization; LINE-1 (L1); genome dynamics

Mesh:

Substances:

Year:  2021        PMID: 34304633      PMCID: PMC8524765          DOI: 10.1177/15353702211031247

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  188 in total

1.  A highly active synthetic mammalian retrotransposon.

Authors:  Jeffrey S Han; Jef D Boeke
Journal:  Nature       Date:  2004-05-20       Impact factor: 49.962

2.  APOBEC3 proteins inhibit human LINE-1 retrotransposition.

Authors:  Heide Muckenfuss; Matthias Hamdorf; Ulrike Held; Mario Perkovic; Johannes Löwer; Klaus Cichutek; Egbert Flory; Gerald G Schumann; Carsten Münk
Journal:  J Biol Chem       Date:  2006-05-30       Impact factor: 5.157

3.  Unconventional translation of mammalian LINE-1 retrotransposons.

Authors:  Reid S Alisch; Jose L Garcia-Perez; Alysson R Muotri; Fred H Gage; John V Moran
Journal:  Genes Dev       Date:  2006-01-15       Impact factor: 11.361

4.  DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters.

Authors:  K D Robertson; S Ait-Si-Ali; T Yokochi; P A Wade; P L Jones; A P Wolffe
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

5.  Hypomethylation of LINE1 retrotransposon in human hepatocellular carcinomas, but not in surrounding liver cirrhosis.

Authors:  D Takai; Y Yagi; N Habib; T Sugimura; T Ushijima
Journal:  Jpn J Clin Oncol       Date:  2000-07       Impact factor: 3.019

6.  Characterization of LINE-1 ribonucleoprotein particles.

Authors:  Aurélien J Doucet; Amy E Hulme; Elodie Sahinovic; Deanna A Kulpa; John B Moldovan; Huira C Kopera; Jyoti N Athanikar; Manel Hasnaoui; Alain Bucheton; John V Moran; Nicolas Gilbert
Journal:  PLoS Genet       Date:  2010-10-07       Impact factor: 5.917

7.  Undermethylation of specific LINE-1 sequences in human cells producing a LINE-1-encoded protein.

Authors:  R E Thayer; M F Singer; T G Fanning
Journal:  Gene       Date:  1993-11-15       Impact factor: 3.688

8.  Developmentally regulated piRNA clusters implicate MILI in transposon control.

Authors:  Alexei A Aravin; Ravi Sachidanandam; Angelique Girard; Katalin Fejes-Toth; Gregory J Hannon
Journal:  Science       Date:  2007-04-19       Impact factor: 47.728

9.  MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

Authors:  Marian Mellén; Pinar Ayata; Scott Dewell; Skirmantas Kriaucionis; Nathaniel Heintz
Journal:  Cell       Date:  2012-12-21       Impact factor: 41.582

10.  GASZ is essential for male meiosis and suppression of retrotransposon expression in the male germline.

Authors:  Lang Ma; Gregory M Buchold; Michael P Greenbaum; Angshumoy Roy; Kathleen H Burns; Huifeng Zhu; Derek Y Han; R Alan Harris; Cristian Coarfa; Preethi H Gunaratne; Wei Yan; Martin M Matzuk
Journal:  PLoS Genet       Date:  2009-09-04       Impact factor: 5.917

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  1 in total

Review 1.  Role of Transposable Elements in Genome Stability: Implications for Health and Disease.

Authors:  Audesh Bhat; Trupti Ghatage; Sonali Bhan; Ganesh P Lahane; Arti Dhar; Rakesh Kumar; Raj K Pandita; Krishna M Bhat; Kenneth S Ramos; Tej K Pandita
Journal:  Int J Mol Sci       Date:  2022-07-15       Impact factor: 6.208

  1 in total

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