Literature DB >> 34299001

G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story.

Adriana Volná1, Martin Bartas2, Václav Karlický1,3, Jakub Nezval1, Kristýna Kundrátová2, Petr Pečinka2, Vladimír Špunda1,3, Jiří Červeň2.   

Abstract

G-quadruplexes have long been perceived as rare and physiologically unimportant nucleic acid structures. However, several studies have revealed their importance in molecular processes, suggesting their possible role in replication and gene expression regulation. Pathways involving G-quadruplexes are intensively studied, especially in the context of human diseases, while their involvement in gene expression regulation in plants remains largely unexplored. Here, we conducted a bioinformatic study and performed a complex circular dichroism measurement to identify a stable G-quadruplex in the gene RPB1, coding for the RNA polymerase II large subunit. We found that this G-quadruplex-forming locus is highly evolutionarily conserved amongst plants sensu lato (Archaeplastida) that share a common ancestor more than one billion years old. Finally, we discussed a new hypothesis regarding G-quadruplexes interacting with UV light in plants to potentially form an additional layer of the regulatory network.

Entities:  

Keywords:  UV light; circular dichroism; evolution; nucleic acids; plant science

Year:  2021        PMID: 34299001     DOI: 10.3390/ijms22147381

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  3 in total

1.  c-MYC and HIF1α promoter G-quadruplexes dependent metabolic regulation mechanism of berberine in colon cancer.

Authors:  Lina Wen; Zongqiang Han; Jianhui Li; Yanlin Du
Journal:  J Gastrointest Oncol       Date:  2022-06

2.  Searching for G-Quadruplex-Binding Proteins in Plants: New Insight into Possible G-Quadruplex Regulation.

Authors:  Adriana Volná; Martin Bartas; Jakub Nezval; Vladimír Špunda; Petr Pečinka; Jiří Červeň
Journal:  BioTech (Basel)       Date:  2021-09-22

3.  The Newly Sequenced Genome of Pisum sativum Is Replete with Potential G-Quadruplex-Forming Sequences-Implications for Evolution and Biological Regulation.

Authors:  Michaela Dobrovolná; Natália Bohálová; Vratislav Peška; Jiawei Wang; Yu Luo; Martin Bartas; Adriana Volná; Jean-Louis Mergny; Václav Brázda
Journal:  Int J Mol Sci       Date:  2022-07-30       Impact factor: 6.208

  3 in total

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