Literature DB >> 34294872

Genome of the world's smallest flowering plant, Wolffia australiana, helps explain its specialized physiology and unique morphology.

Halim Park1, Jin Hwa Park1, Yejin Lee1, Dong U Woo1, Ho Hwi Jeon1, Yeon Woo Sung1, Sangrea Shim2,3, Sang Hee Kim1,4, Kyun Oh Lee1,4, Jae-Yean Kim1,4, Chang-Kug Kim5, Debashish Bhattacharya6, Hwan Su Yoon7, Yang Jae Kang8,9.   

Abstract

Watermeal, Wolffia australiana, is the smallest known flowering monocot and is rich in protein. Despite its great potential as a biotech crop, basic research on Wolffia is in its infancy. Here, we generated the reference genome of a species of watermeal, W. australiana, and identified the genome-wide features that may contribute to its atypical anatomy and physiology, including the absence of roots, adaxial stomata development, and anaerobic life as a turion. In addition, we found evidence of extensive genome rearrangements that may underpin the specialized aquatic lifestyle of watermeal. Analysis of the gene inventory of this intriguing species helps explain the distinct characteristics of W. australiana and its unique evolutionary trajectory.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34294872     DOI: 10.1038/s42003-021-02422-5

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  61 in total

1.  Scaffolding pre-assembled contigs using SSPACE.

Authors:  Marten Boetzer; Christiaan V Henkel; Hans J Jansen; Derek Butler; Walter Pirovano
Journal:  Bioinformatics       Date:  2010-12-12       Impact factor: 6.937

2.  Nutrient removal and starch production through cultivation of Wolffia arrhiza.

Authors:  M Fujita; K Mori; T Kodera
Journal:  J Biosci Bioeng       Date:  1999       Impact factor: 2.894

3.  Developmental Control of Apiogalacturonan Biosynthesis and UDP-Apiose Production in a Duckweed.

Authors:  J M Longland; S C Fry; A J Trewavas
Journal:  Plant Physiol       Date:  1989-07       Impact factor: 8.340

4.  Relative in vitro growth rates of duckweeds (Lemnaceae) - the most rapidly growing higher plants.

Authors:  P Ziegler; K Adelmann; S Zimmer; C Schmidt; K-J Appenroth
Journal:  Plant Biol (Stuttg)       Date:  2014-05-06       Impact factor: 3.081

5.  Development of Efficient Protocols for Stable and Transient Gene Transformation for Wolffia Globosa Using Agrobacterium.

Authors:  P P M Heenatigala; Jingjing Yang; Anthony Bishopp; Zuoliang Sun; Gaojie Li; Sunjeet Kumar; Shiqi Hu; Zhigang Wu; Wei Lin; Lunguang Yao; Pengfei Duan; Hongwei Hou
Journal:  Front Chem       Date:  2018-06-21       Impact factor: 5.221

6.  Nutritional Value of the Duckweed Species of the Genus Wolffia (Lemnaceae) as Human Food.

Authors:  Klaus-J Appenroth; K Sowjanya Sree; Manuela Bog; Josef Ecker; Claudine Seeliger; Volker Böhm; Stefan Lorkowski; Katrin Sommer; Walter Vetter; Karla Tolzin-Banasch; Rita Kirmse; Matthias Leiterer; Christine Dawczynski; Gerhard Liebisch; Gerhard Jahreis
Journal:  Front Chem       Date:  2018-10-29       Impact factor: 5.221

7.  Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds.

Authors:  Phuong T N Hoang; Veit Schubert; Armin Meister; Jörg Fuchs; Ingo Schubert
Journal:  Sci Rep       Date:  2019-03-01       Impact factor: 4.379

8.  The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.

Authors:  W Wang; G Haberer; H Gundlach; C Gläßer; T Nussbaumer; M C Luo; A Lomsadze; M Borodovsky; R A Kerstetter; J Shanklin; D W Byrant; T C Mockler; K J Appenroth; J Grimwood; J Jenkins; J Chow; C Choi; C Adam; X-H Cao; J Fuchs; I Schubert; D Rokhsar; J Schmutz; T P Michael; K F X Mayer; J Messing
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

9.  The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications.

Authors:  Arne Van Hoeck; Nele Horemans; Pieter Monsieurs; Hieu Xuan Cao; Hildegarde Vandenhove; Ronny Blust
Journal:  Biotechnol Biofuels       Date:  2015-11-25       Impact factor: 6.040

10.  ARCS: scaffolding genome drafts with linked reads.

Authors:  Sarah Yeo; Lauren Coombe; René L Warren; Justin Chu; Inanç Birol
Journal:  Bioinformatics       Date:  2018-03-01       Impact factor: 6.937

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  2 in total

1.  Identification and expression analysis of GARP superfamily genes in response to nitrogen and phosphorus stress in Spirodela polyrhiza.

Authors:  Xuyao Zhao; Jingjing Yang; Xiaozhe Li; Gaojie Li; Zuoliang Sun; Yan Chen; Yimeng Chen; Manli Xia; Yixian Li; Lunguang Yao; Hongwei Hou
Journal:  BMC Plant Biol       Date:  2022-06-25       Impact factor: 5.260

Review 2.  Pervasive genome duplications across the plant tree of life and their links to major evolutionary innovations and transitions.

Authors:  Xin Qiao; Shaoling Zhang; Andrew H Paterson
Journal:  Comput Struct Biotechnol J       Date:  2022-06-15       Impact factor: 6.155

  2 in total

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