Literature DB >> 34291396

Genetic variation and relationships between Azerbaijani and Turkish olive genetic resources.

Sevin Teoman Duran1, Saltanat Aghayeva2, Zeynal Akparov2, Ayaz Mammadov2, Rana Asgarova2, Osman Yasar Uslu3, Osman Kirikoglu3, Ufuk Tan Duran3, Meryem Ipek3, Erdogan Barut3, Sezai Ercisli4, Gulce Ilhan5, Ahmet Ipek1,3.   

Abstract

Olive (Olea europaea L.) is one of the most economically important crop from east to the west around the world. The aim of this research was to investigate the genetic relationship among 41 olive genotypes, including 11 well-known Turkish cultivars and 30 Azerbaijani olive genotypes using simple sequence repeat (SSR) markers. In this study, 19 SSR markers were amplified 115 polymorphic SSR alleles. The number of polymorphic alleles ranged from 3 to 10 with an average of 6.05. The observed heterozygosity (Ho) varied from 0.05 to 0.93 with an average of 0.63 and expected heterozygosity (He) differed from 0.26 to 0.86 with an average of 0.72. The polymorphism information content (PIC) ranged from 0.23 to 0.85 with a mean of 0.68. A UPGMA cluster analysis grouped olive genotypes into two distinct clusters and both clusters were divided into two subgroups. Similarly, STRUCTURE analysis assigned olive genotypes into two different gene pools (K = 2) and four gene pools were identified representing the two subgroups by STRUCTURE analysis for K = 4. The genetic similarity of olive genotypes ranged from 0.36 to 0.95. These results revealed that there was a high genetic variation among 30 Azerbaijani olive genotypes. 'Ayvalık 1'and 'Ayvalık 2' from Azerbaijani olive genotypes were different from Turkish local olive cultivar, "Ayvalık" indicating homonymy. This research also highlighted that Azerbaijani olive genotypes were totally distinct from Turkish olive cultivars demonstrating that these olive genotypes might have been imported to Azerbaijan from different countries other than Turkey. The outcomes of this study indicated that these diverse olive genotypes could be useful for development of new olive varieties in Azerbaijan and future breeding programs between two countries could be enhanced by means of these results.
© 2021. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Genetic diversity; Olea europea L.; SSR marker; STRUCTURE analysis

Mesh:

Year:  2021        PMID: 34291396     DOI: 10.1007/s11033-021-06564-x

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.742


  15 in total

1.  Microsatellite markers are powerful tools for discriminating among olive cultivars and assigning them to geographically defined populations.

Authors:  V Sarri; L Baldoni; A Porceddu; N G M Cultrera; A Contento; M Frediani; A Belaj; I Trujillo; P G Cionini
Journal:  Genome       Date:  2006-12       Impact factor: 2.166

2.  Molecular characterization of olive cultivars using amplified fragment length polymorphism markers.

Authors:  S Ercisli; E Barut; A Ipek
Journal:  Genet Mol Res       Date:  2009-04-14

3.  SSR analysis demonstrates that olive production in the southern Marmara region in Turkey uses a single genotype.

Authors:  A Ipek; E Barut; H Gulen; A T Oz; N A Tangu; M Ipek
Journal:  Genet Mol Res       Date:  2009-10-20

4.  Identification of molecular markers associated with fruit traits in olive and assessment of olive core collection with AFLP markers and fruit traits.

Authors:  M Ipek; M Seker; A Ipek; M K Gul
Journal:  Genet Mol Res       Date:  2015-03-31

5.  Identification of simple sequence repeats (SSRs) in olive ( Olea europaea L.).

Authors:  F. Carriero; G. Fontanazza; F. Cellini; G. Giorio
Journal:  Theor Appl Genet       Date:  2002-02       Impact factor: 5.699

6.  Microsatellite markers isolated in olive ( Olea europaea L.) are suitable for individual fingerprinting and reveal polymorphism within ancient cultivars.

Authors:  G. Cipriani; M. T. Marrazzo; R. Marconi; A. Cimato; R. Testolin
Journal:  Theor Appl Genet       Date:  2002-02       Impact factor: 5.699

7.  SSR marker-based DNA fingerprinting and cultivar identification of olives (Olea europaea).

Authors:  Sezai Ercisli; Ahmet Ipek; Erdogan Barut
Journal:  Biochem Genet       Date:  2011-04-08       Impact factor: 1.890

Review 8.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

9.  Statistical characterization of sicilian olive oils from the Peloritana and Maghrebian zones according to the fatty acid profile.

Authors:  Giuseppa Di Bella; Roberta Maisano; Lara La Pera; Vincenzo Lo Turco; Francesco Salvo; Giacomo Dugo
Journal:  J Agric Food Chem       Date:  2007-07-06       Impact factor: 5.279

10.  Genetic flow among olive populations within the Mediterranean basin.

Authors:  Valentina di Rienzo; Sara Sion; Francesca Taranto; Nunzio D'Agostino; Cinzia Montemurro; Valentina Fanelli; Wilma Sabetta; Saliha Boucheffa; Abderezak Tamendjari; Antonella Pasqualone; Marion Zammit-Mangion; Monica Marilena Miazzi
Journal:  PeerJ       Date:  2018-07-11       Impact factor: 2.984

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  1 in total

1.  Assessment of population structure, genetic diversity and relationship of Mediterranean olive accessions using SSR markers and computational tools.

Authors:  Rayda Ben Ayed; Sezai Ercişli; Mohsen Hanana; Ahmed Rebai; Fabienne Moreau
Journal:  Biotechnol Lett       Date:  2021-11-11       Impact factor: 2.461

  1 in total

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