Literature DB >> 34291235

Convolutional Bayesian Models for Anatomical Landmarking on Multi-Dimensional Shapes.

Yonghui Fan1, Yalin Wang1.   

Abstract

The anatomical landmarking on statistical shape models is widely used in structural and morphometric analyses. The current study focuses on leveraging geometric features to realize an automatic and reliable landmarking. The existing implementations usually rely on classical geometric features and data-driven learning methods. However, such designs often have limitations to specific shape types. Additionally, calculating the features as a standalone step increases the computational cost. In this paper, we propose a convolutional Bayesian model for anatomical landmarking on multi-dimensional shapes. The main idea is to embed the convolutional filtering in a stationary kernel so that the geometric features are efficiently captured and implicitly encoded into the prior knowledge of a Gaussian process. In this way, the posterior inference is geometrically meaningful without entangling with extra features. By using a Gaussian process regression framework and the active learning strategy, our method is flexible and efficient in extracting arbitrary numbers of landmarks. We demonstrate extensive applications on various publicly available datasets, including one brain imaging cohort and three skeletal anatomy datasets. Both the visual and numerical evaluations verify the effectiveness of our method in extracting significant landmarks.

Keywords:  Anatomical landmarking; Gaussian process kernels

Year:  2020        PMID: 34291235      PMCID: PMC8291336          DOI: 10.1007/978-3-030-59719-1_76

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  13 in total

1.  Algorithms to automatically quantify the geometric similarity of anatomical surfaces.

Authors:  Doug M Boyer; Yaron Lipman; Elizabeth St Clair; Jesus Puente; Biren A Patel; Thomas Funkhouser; Jukka Jernvall; Ingrid Daubechies
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-24       Impact factor: 11.205

2.  A 2D/3D correspondence building method for reconstruction of a patient-specific 3D bone surface model using point distribution models and calibrated X-ray images.

Authors:  Guoyan Zheng; Sebastian Gollmer; Steffen Schumann; Xiao Dong; Thomas Feilkas; Miguel A González Ballester
Journal:  Med Image Anal       Date:  2008-12-24       Impact factor: 8.545

3.  Statistical model-based segmentation of the proximal femur in digital antero-posterior (AP) pelvic radiographs.

Authors:  Weiguo Xie; Jochen Franke; Cheng Chen; Paul A Grützner; Steffen Schumann; Lutz-P Nolte; Guoyan Zheng
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-07-31       Impact factor: 2.924

4.  Morphometric Gaussian Process for Landmarking on Grey Matter Tetrahedral Models.

Authors:  Yonghui Fan; Natasha Leporé; Yalin Wang
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-01-03

5.  Clinical relevance of augmented statistical shape model of the scapula in the glenoid region.

Authors:  Asma Salhi; Valérie Burdin; Sylvain Brochard; Tinashe E Mutsvangwa; Bhushan Borotikar
Journal:  Med Eng Phys       Date:  2020-01-03       Impact factor: 2.242

6.  Intrinsic Patch-Based Cortical Anatomical Parcellation Using Graph Convolutional Neural Network on Surface Manifold.

Authors:  Zhengwang Wu; Fenqiang Zhao; Jing Xia; Li Wang; Weili Lin; John H Gilmore; Gang Li; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

7.  Towards a Holistic Cortical Thickness Descriptor: Heat Kernel-Based Grey Matter Morphology Signatures.

Authors:  Gang Wang; Yalin Wang
Journal:  Neuroimage       Date:  2016-12-26       Impact factor: 6.556

8.  Fast Polynomial Approximation of Heat Kernel Convolution on Manifolds and Its Application to Brain Sulcal and Gyral Graph Pattern Analysis.

Authors:  Shih-Gu Huang; Ilwoo Lyu; Anqi Qiu; Moo K Chung
Journal:  IEEE Trans Med Imaging       Date:  2020-01-17       Impact factor: 10.048

9.  A Tetrahedron-based Heat Flux Signature for Cortical Thickness Morphometry Analysis.

Authors:  Yonghui Fan; Gang Wang; Natasha Lepore; Yalin Wang
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

Review 10.  Brain atrophy in Alzheimer's Disease and aging.

Authors:  Lorenzo Pini; Michela Pievani; Martina Bocchetta; Daniele Altomare; Paolo Bosco; Enrica Cavedo; Samantha Galluzzi; Moira Marizzoni; Giovanni B Frisoni
Journal:  Ageing Res Rev       Date:  2016-01-28       Impact factor: 10.895

View more
  1 in total

1.  Geometry-Aware Hierarchical Bayesian Learning on Manifolds.

Authors:  Yonghui Fan; Yalin Wang
Journal:  IEEE Winter Conf Appl Comput Vis       Date:  2022-02-15
  1 in total

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