Literature DB >> 34288936

Environmental responsiveness of flowering time in cassava genotypes and associated transcriptome changes.

Deborah N Oluwasanya1,2, Andreas Gisel2,3, Livia Stavolone2,4, Tim L Setter1.   

Abstract

Cassava is an important food security crop in tropical regions of the world. Cassava improvement by breeding is limited by its delayed and poor production of flowers, such that cassava flowering under field conditions indirectly lengthens the breeding cycle. By studying genotype and environment interaction under two Nigerian field conditions (Ubiaja and Ibadan) and three controlled temperature conditions (22°C/18°C, 28/24°C and 34/30°C (day/night)), we found that while early flowering genotypes flowered at similar times and rates under all growing conditions (unfavorable and favorable field and controlled-temperature environments), late flowering genotypes were environmentally sensitive such that they were substantially delayed in unfavorable environments. On the basis of nodes-to-flower, flowering of late genotypes approached the flowering time of early flowering genotypes under relatively cool Ubiaja field conditions and in growth chambers at 22°C, whereas warmer temperatures elicited a delaying effect. Analysis of transcriptomes from leaves of field and controlled-temperature environments revealed that conditions which promote early flowering in cassava have low expression of the flowering repressor gene TEMPRANILLO 1 (TEM1), before and after flowering. Expression data of field plants showed that the balance between flower stimulatory and inhibitory signaling appeared to correlate with flowering time across the environments and genotypes.

Entities:  

Year:  2021        PMID: 34288936     DOI: 10.1371/journal.pone.0253555

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  41 in total

Review 1.  Regulation and identity of florigen: FLOWERING LOCUS T moves center stage.

Authors:  Franziska Turck; Fabio Fornara; George Coupland
Journal:  Annu Rev Plant Biol       Date:  2008       Impact factor: 26.379

Review 2.  Transitioning to the Next Phase: The Role of Sugar Signaling throughout the Plant Life Cycle.

Authors:  Astrid Wingler
Journal:  Plant Physiol       Date:  2017-09-28       Impact factor: 8.340

3.  Field transcriptome analysis reveals a molecular mechanism for cassava-flowering in a mountainous environment in Southeast Asia.

Authors:  Hiroki Tokunaga; Do Thi Nhu Quynh; Nguyen Hai Anh; Pham Thi Nhan; Akihiro Matsui; Satoshi Takahashi; Maho Tanaka; Ngo Minh Anh; Nguyen Van Dong; Le Huy Ham; Asuka Higo; Truong Minh Hoa; Manabu Ishitani; Nguyen Ba Nhat Minh; Nguyen Huu Hy; Pao Srean; Vu Anh Thu; Nguyen Ba Tung; Nguyen Anh Vu; Kaho Yamaguchi; Hiroyuki Tsuji; Yoshinori Utsumi; Motoaki Seki
Journal:  Plant Mol Biol       Date:  2020-09-09       Impact factor: 4.076

4.  SHORT VEGETATIVE PHASE Up-Regulates TEMPRANILLO2 Floral Repressor at Low Ambient Temperatures.

Authors:  Esther Marín-González; Luis Matías-Hernández; Andrea E Aguilar-Jaramillo; Jeong Hwan Lee; Ji Hoon Ahn; Paula Suárez-López; Soraya Pelaz
Journal:  Plant Physiol       Date:  2015-08-04       Impact factor: 8.340

5.  Phytozome: a comparative platform for green plant genomics.

Authors:  David M Goodstein; Shengqiang Shu; Russell Howson; Rochak Neupane; Richard D Hayes; Joni Fazo; Therese Mitros; William Dirks; Uffe Hellsten; Nicholas Putnam; Daniel S Rokhsar
Journal:  Nucleic Acids Res       Date:  2011-11-22       Impact factor: 16.971

6.  FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana.

Authors:  Frédéric Bouché; Guillaume Lobet; Pierre Tocquin; Claire Périlleux
Journal:  Nucleic Acids Res       Date:  2015-10-17       Impact factor: 16.971

7.  Overexpression of Arabidopsis FLOWERING LOCUS T (FT) gene improves floral development in cassava (Manihot esculenta, Crantz).

Authors:  O Sarah Adeyemo; Paul Chavarriaga; Joe Tohme; Martin Fregene; Seth J Davis; Tim L Setter
Journal:  PLoS One       Date:  2017-07-28       Impact factor: 3.240

8.  A comparison between whole transcript and 3' RNA sequencing methods using Kapa and Lexogen library preparation methods.

Authors:  Feiyang Ma; Brie K Fuqua; Yehudit Hasin; Clara Yukhtman; Chris D Vulpe; Aldons J Lusis; Matteo Pellegrini
Journal:  BMC Genomics       Date:  2019-01-07       Impact factor: 3.969

9.  Prospects for Genomic Selection in Cassava Breeding.

Authors:  Marnin D Wolfe; Dunia Pino Del Carpio; Olumide Alabi; Lydia C Ezenwaka; Ugochukwu N Ikeogu; Ismail S Kayondo; Roberto Lozano; Uche G Okeke; Alfred A Ozimati; Esuma Williams; Chiedozie Egesi; Robert S Kawuki; Peter Kulakow; Ismail Y Rabbi; Jean-Luc Jannink
Journal:  Plant Genome       Date:  2017-11       Impact factor: 4.089

10.  Comparative morphology, biology and histology of reproductive development in three lines of Manihot esculenta Crantz (Euphorbiaceae: Crotonoideae).

Authors:  P I P Perera; M Quintero; B Dedicova; J D J S Kularatne; H Ceballos
Journal:  AoB Plants       Date:  2013-01-11       Impact factor: 3.276

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  1 in total

1.  Long-day photoperiod and cool temperature induce flowering in cassava: Expression of signaling genes.

Authors:  Peter T Hyde; Tim L Setter
Journal:  Front Plant Sci       Date:  2022-09-16       Impact factor: 6.627

  1 in total

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