Literature DB >> 34282159

Describing chain-like assembly of ethoxygroup-functionalized organic molecules on Au(111) using high-throughput simulations.

Jeffrey Kelling1, Robin Ohmann2,3, Peter Zahn4, Jörg Meyer2, Tim Kühne5, Gianaurelio Cuniberti2, Jannic Wolf6, Guido Juckeland1, Thomas Huhn6, Francesca Moresco5, Sibylle Gemming5,7.   

Abstract

Due to the low corrugation of the Au(111) surface, n class="Chemical">1,4-bis(phenylethynyl)-2,5-bis(ethoxy)benzene (PEEB) molecules can form quasi interlocked lateral patterns, which are observed in scanning tunneling microscopy experiments at low temperatures. We demonstrate a multi-dimensional clustering approach to quantify the anisotropic pair-wise interaction of molecules and explain these patterns. We perform high-throughput calculations to evaluate an energy function, which incorporates the adsorption energy of single PEEB molecules on the metal surface and the intermolecular interaction energy of a pair of PEEB molecules. The analysis of the energy function reveals, that, depending on coverage density, specific types of pattern are preferred which can potentially be exploited to form one-dimensional molecular wires on Au(111).
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34282159     DOI: 10.1038/s41598-021-93724-5

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  9 in total

1.  Special quasirandom structures.

Authors: 
Journal:  Phys Rev Lett       Date:  1990-07-16       Impact factor: 9.161

2.  DFTB+, a sparse matrix-based implementation of the DFTB method.

Authors:  B Aradi; B Hourahine; Th Frauenheim
Journal:  J Phys Chem A       Date:  2007-06-14       Impact factor: 2.781

3.  Small-molecule solar cells-status and perspectives.

Authors:  M Riede; T Mueller; W Tress; R Schueppel; K Leo
Journal:  Nanotechnology       Date:  2008-09-25       Impact factor: 3.874

4.  Ogre: A Python package for molecular crystal surface generation with applications to surface energy and crystal habit prediction.

Authors:  Shuyang Yang; Imanuel Bier; Wen Wen; Jiawei Zhan; Saeed Moayedpour; Noa Marom
Journal:  J Chem Phys       Date:  2020-06-28       Impact factor: 3.488

5.  STM induced manipulation of azulene-based molecules and nanostructures: the role of the dipole moment.

Authors:  Tim Kühne; Kwan Ho Au-Yeung; Frank Eisenhut; Oumaima Aiboudi; Dmitry A Ryndyk; Gianaurelio Cuniberti; Franziska Lissel; Francesca Moresco
Journal:  Nanoscale       Date:  2020-12-23       Impact factor: 7.790

6.  AuToGraFS: automatic topological generator for framework structures.

Authors:  Matthew A Addicoat; Damien E Coupry; Thomas Heine
Journal:  J Phys Chem A       Date:  2014-09-29       Impact factor: 2.781

7.  Supramolecular chemistry based on 4-acetylbiphenyl on Au(111).

Authors:  Roberto Robles; Vladimír Zobač; Kwan Ho Au Yeung; Francesca Moresco; Christian Joachim; Nicolás Lorente
Journal:  Phys Chem Chem Phys       Date:  2020-05-19       Impact factor: 3.676

8.  Molecules for organic electronics studied one by one.

Authors:  Jörg Meyer; Anja Wadewitz; Cormac Toher; Roland Gresser; Karl Leo; Moritz Riede; Francesca Moresco; Gianaurelio Cuniberti
Journal:  Phys Chem Chem Phys       Date:  2011-07-28       Impact factor: 3.676

9.  Time-Dependent Density-Functional Description of the (1)La State in Polycyclic Aromatic Hydrocarbons: Charge-Transfer Character in Disguise?

Authors:  Ryan M Richard; John M Herbert
Journal:  J Chem Theory Comput       Date:  2011-04-05       Impact factor: 6.006

  9 in total

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