Literature DB >> 34279931

Discovery of Selective Small-Molecule Inhibitors for the ENL YEATS Domain.

Xinyu R Ma1, Longxia Xu2, Shiqing Xu1, Brianna J Klein3, Hongkuan Wang2, Sukant Das1, Kuai Li2, Kai S Yang1, Sana Sohail2, Andrew Chapman1, Tatiana G Kutateladze3, Xiaobing Shi2, Wenshe Ray Liu1,4,5,6, Hong Wen2.   

Abstract

Eleven-nineteen leukemia (ENL) protein is a histone acetylation reader essential for disease maintenance in acute leukemias, in particular, the mixed-lineage leukemia (MLL)-rearranged leukemia. In this study, we carried out high-throughput screening of a small-molecule library to identify inhibitors for the ENL YEATS domain. Structure-activity relationship studies of the hits and structure-based inhibitor design led to two compounds, 11 and 24, with IC50 values below 100 nM in inhibiting the ENL-acetyl-H3 interaction. Both compounds, and their precursor compound 7, displayed strong selectivity toward the ENL YEATS domain over all other human YEATS domains. Moreover, 7 exhibited on-target inhibition of ENL in cultured cells and a synergistic effect with the bromodomain and extraterminal domain inhibitor JQ1 in killing leukemia cells. Together, we have developed selective chemical probes for the ENL YEATS domain, providing the basis for further medicinal chemistry-based optimization to advance both basic and translational research of ENL.

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Year:  2021        PMID: 34279931      PMCID: PMC8486320          DOI: 10.1021/acs.jmedchem.1c00367

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   8.039


  39 in total

Review 1.  Translating the histone code.

Authors:  T Jenuwein; C D Allis
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

2.  Structure-Based Approach toward Identification of Inhibitory Fragments for Eleven-Nineteen-Leukemia Protein (ENL).

Authors:  David Heidenreich; Moses Moustakim; Jurema Schmidt; Daniel Merk; Paul E Brennan; Oleg Fedorov; Apirat Chaikuad; Stefan Knapp
Journal:  J Med Chem       Date:  2018-11-26       Impact factor: 7.446

3.  Selective Targeting of AF9 YEATS Domain by Cyclopeptide Inhibitors with Preorganized Conformation.

Authors:  Yixiang Jiang; Guochao Chen; Xiao-Meng Li; Sha Liu; Gaofei Tian; Yuanyuan Li; Xin Li; Haitao Li; Xiang David Li
Journal:  J Am Chem Soc       Date:  2020-12-11       Impact factor: 15.419

4.  Targeted disruption of the GAS41 gene encoding a putative transcription factor indicates that GAS41 is essential for cell viability.

Authors:  Katrin Zimmermann; Katja Ahrens; Siegfried Matthes; Jean-Marie Buerstedde; Wolf H Strätling; Loc Phi-van
Journal:  J Biol Chem       Date:  2002-03-18       Impact factor: 5.157

5.  The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers.

Authors:  Brianna J Klein; Lianhua Piao; Yuanxin Xi; Hector Rincon-Arano; Scott B Rothbart; Danni Peng; Hong Wen; Connie Larson; Xi Zhang; Xia Zheng; Michael A Cortazar; Pedro V Peña; Anthony Mangan; David L Bentley; Brian D Strahl; Mark Groudine; Wei Li; Xiaobing Shi; Tatiana G Kutateladze
Journal:  Cell Rep       Date:  2014-01-09       Impact factor: 9.423

6.  Structural Insights into Interaction Mechanisms of Alternative Piperazine-urea YEATS Domain Binders in MLLT1.

Authors:  Xiaomin Ni; David Heidenreich; Thomas Christott; James Bennett; Moses Moustakim; Paul E Brennan; Oleg Fedorov; Stefan Knapp; Apirat Chaikuad
Journal:  ACS Med Chem Lett       Date:  2019-11-25       Impact factor: 4.345

7.  AF9 YEATS domain links histone acetylation to DOT1L-mediated H3K79 methylation.

Authors:  Yuanyuan Li; Hong Wen; Yuanxin Xi; Kaori Tanaka; Haibo Wang; Danni Peng; Yongfeng Ren; Qihuang Jin; Sharon Y R Dent; Wei Li; Haitao Li; Xiaobing Shi
Journal:  Cell       Date:  2014-10-23       Impact factor: 41.582

8.  AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.

Authors:  Garrett M Morris; Ruth Huey; William Lindstrom; Michel F Sanner; Richard K Belew; David S Goodsell; Arthur J Olson
Journal:  J Comput Chem       Date:  2009-12       Impact factor: 3.376

9.  ENL links histone acetylation to oncogenic gene expression in acute myeloid leukaemia.

Authors:  Liling Wan; Hong Wen; Yuanyuan Li; Jie Lyu; Yuanxin Xi; Takayuki Hoshii; Julia K Joseph; Xiaolu Wang; Yong-Hwee E Loh; Michael A Erb; Amanda L Souza; James E Bradner; Li Shen; Wei Li; Haitao Li; C David Allis; Scott A Armstrong; Xiaobing Shi
Journal:  Nature       Date:  2017-03-01       Impact factor: 49.962

10.  Recognition of histone acetylation by the GAS41 YEATS domain promotes H2A.Z deposition in non-small cell lung cancer.

Authors:  Chih-Chao Hsu; Jiejun Shi; Chao Yuan; Dan Zhao; Shiming Jiang; Jie Lyu; Xiaolu Wang; Haitao Li; Hong Wen; Wei Li; Xiaobing Shi
Journal:  Genes Dev       Date:  2018-02-01       Impact factor: 11.361

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  4 in total

Review 1.  Multifaceted roles of YEATS domain-containing proteins and novel links to neurological diseases.

Authors:  Ranchana Yeewa; Pawita Chaiya; Salinee Jantrapirom; Vorasuk Shotelersuk; Luca Lo Piccolo
Journal:  Cell Mol Life Sci       Date:  2022-03-12       Impact factor: 9.261

2.  A proteolysis-targeting chimera molecule selectively degrades ENL and inhibits malignant gene expression and tumor growth.

Authors:  Xin Li; Yuan Yao; Fangrui Wu; Yongcheng Song
Journal:  J Hematol Oncol       Date:  2022-04-08       Impact factor: 17.388

3.  Fragment-Based Discovery of AF9 YEATS Domain Inhibitors.

Authors:  Yaqian Liu; Ruoxing Jin; Hui Lu; Kangjie Bian; Rui Wang; Lei Wang; Rui Gao; Jiahai Zhang; Jihui Wu; Xuebiao Yao; Xing Liu; Dan Liu; Xisheng Wang; Zhiyong Zhang; Ke Ruan
Journal:  Int J Mol Sci       Date:  2022-03-31       Impact factor: 5.923

4.  Antileishmanial metallodrugs and the elucidation of new drug targets linked to post-translational modifications machinery: pitfalls and progress.

Authors:  Rubens Lima do Monte Neto; Paulo Otávio Lourenço Moreira; Alessandra Mara de Sousa; Miguel Antonio do Nascimento Garcia; Suellen Rodrigues Maran; Nilmar Silvio Moretti
Journal:  Mem Inst Oswaldo Cruz       Date:  2022-03-23       Impact factor: 2.743

  4 in total

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