Literature DB >> 34272525

CRISPR-based diagnostics.

Michael M Kaminski1,2, Omar O Abudayyeh3,4, Jonathan S Gootenberg3,4, Feng Zhang3,4,5,6,7,8, James J Collins9,10,11,12.   

Abstract

The accurate and timely diagnosis of disease is a prerequisite for efficient therapeutic intervention and epidemiological surveillance. Diagnostics based on the detection of nucleic acids are among the most sensitive and specific, yet most such assays require costly equipment and trained personnel. Recent developments in diagnostic technologies, in particular those leveraging clustered regularly interspaced short palindromic repeats (CRISPR), aim to enable accurate testing at home, at the point of care and in the field. In this Review, we provide a rundown of the rapidly expanding toolbox for CRISPR-based diagnostics, in particular the various assays, preamplification strategies and readouts, and highlight their main applications in the sensing of a wide range of molecular targets relevant to human health.
© 2021. Springer Nature Limited.

Entities:  

Year:  2021        PMID: 34272525     DOI: 10.1038/s41551-021-00760-7

Source DB:  PubMed          Journal:  Nat Biomed Eng        ISSN: 2157-846X            Impact factor:   25.671


  1 in total

1.  Nucleic acid detection with CRISPR-Cas13a/C2c2.

Authors:  Jonathan S Gootenberg; Omar O Abudayyeh; Jeong Wook Lee; Patrick Essletzbichler; Aaron J Dy; Julia Joung; Vanessa Verdine; Nina Donghia; Nichole M Daringer; Catherine A Freije; Cameron Myhrvold; Roby P Bhattacharyya; Jonathan Livny; Aviv Regev; Eugene V Koonin; Deborah T Hung; Pardis C Sabeti; James J Collins; Feng Zhang
Journal:  Science       Date:  2017-04-13       Impact factor: 47.728

  1 in total
  54 in total

Review 1.  Two Years into the COVID-19 Pandemic: Lessons Learned.

Authors:  Severino Jefferson Ribeiro da Silva; Jessica Catarine Frutuoso do Nascimento; Renata Pessôa Germano Mendes; Klarissa Miranda Guarines; Caroline Targino Alves da Silva; Poliana Gomes da Silva; Jurandy Júnior Ferraz de Magalhães; Justin R J Vigar; Abelardo Silva-Júnior; Alain Kohl; Keith Pardee; Lindomar Pena
Journal:  ACS Infect Dis       Date:  2022-08-08       Impact factor: 5.578

2.  Targeted Modification of Mammalian DNA by a Novel Type V Cas12a Endonuclease from Ruminococcus bromii.

Authors:  Ruslan Vasilev; Natalia Gunitseva; Regina Shebanova; Aleksei Korzhenkov; Anna Vlaskina; Marta Evteeva; Irina Polushkina; Natalia Nikitchina; Stepan Toshchakov; Piotr Kamenski; Maxim Patrushev; Ilya Mazunin
Journal:  Int J Mol Sci       Date:  2022-08-18       Impact factor: 6.208

3.  Enhancement of CRISPR/Cas12a trans-cleavage activity using hairpin DNA reporters.

Authors:  Marianna Rossetti; Rosa Merlo; Neda Bagheri; Danila Moscone; Anna Valenti; Aakash Saha; Pablo R Arantes; Rudy Ippodrino; Francesco Ricci; Ida Treglia; Elisabetta Delibato; John van der Oost; Giulia Palermo; Giuseppe Perugino; Alessandro Porchetta
Journal:  Nucleic Acids Res       Date:  2022-08-12       Impact factor: 19.160

4.  Engineered LwaCas13a with enhanced collateral activity for nucleic acid detection.

Authors:  Jie Yang; Yang Song; Xiangyu Deng; Jeffrey A Vanegas; Zheng You; Yuxuan Zhang; Zhengyan Weng; Lori Avery; Kevin D Dieckhaus; Advaith Peddi; Yang Gao; Yi Zhang; Xue Gao
Journal:  Nat Chem Biol       Date:  2022-09-22       Impact factor: 16.174

Review 5.  Diversity of mycoviruses in edible fungi.

Authors:  Yanjing Zhang; Jie Gao; Yu Li
Journal:  Virus Genes       Date:  2022-06-06       Impact factor: 2.198

6.  Photocontrolled crRNA activation enables robust CRISPR-Cas12a diagnostics.

Authors:  Menglu Hu; Zhiqiang Qiu; Zirong Bi; Tian Tian; Yongzhong Jiang; Xiaoming Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

7.  Fabrication of lateral flow immunoassay strip for rapid detection of acute hepatopancreatic necrosis disease.

Authors:  Ngoc-Diem Duong; Khai-Hoan Nguyen-Phuoc; Thuy-Dung Mai-Hoang; Kim-Yen Thi Do; Tuan-Binh Huynh; Nguyet-Thu Thi Nguyen; Thuoc Linh Tran; Hieu Tran-Van
Journal:  3 Biotech       Date:  2022-08-24       Impact factor: 2.893

8.  Smartphone-Based SARS-CoV-2 and Variants Detection System using Colorimetric DNAzyme Reaction Triggered by Loop-Mediated Isothermal Amplification (LAMP) with Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR).

Authors:  Jayeon Song; Baekdong Cha; Jeong Moon; Hyowon Jang; Sunjoo Kim; Jieun Jang; Dongeun Yong; Hyung-Jun Kwon; In-Chul Lee; Eun-Kyung Lim; Juyeon Jung; Hyun Gyu Park; Taejoon Kang
Journal:  ACS Nano       Date:  2022-06-23       Impact factor: 18.027

9.  Passivated Impedimetric Sensors for Immobilization-Free Pathogen Detection by Isothermal Amplification and Melt Curve Analysis.

Authors:  Matthias Steinmaßl; Jamila Boudaden; Güven Edgü; Lena Julie Freund; Simon Meyer; Noa Mordehay; Melissa Soto; Hanns-Erik Endres; Jost Muth; Dirk Prüfer; Wilfried Lerch; Christoph Kutter
Journal:  Biosensors (Basel)       Date:  2022-04-20

Review 10.  Diagnostics of COVID-19 Based on CRISPR-Cas Coupled to Isothermal Amplification: A Comparative Analysis and Update.

Authors:  Armando Hernandez-Garcia; Melissa D Morales-Moreno; Erick G Valdés-Galindo; Eric P Jimenez-Nieto; Andrea Quezada
Journal:  Diagnostics (Basel)       Date:  2022-06-10
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