Literature DB >> 34257164

A innovative prognostic symbol based on neutrophil extracellular traps (NETs)-related lncRNA signature in non-small-cell lung cancer.

Chen Fang1, Fen Liu2, Yong Wang1, Shangkun Yuan1, Renfang Chen1, Xiaotong Qiu1, Xiaoying Qian1, Xinwei Zhang1, Zhehao Xiao1, Qian Wang1, Biqi Fu3, Yong Li1.   

Abstract

Neutrophil extracellular traps (NETs) are closely related to cancer progression. NETs-related lncRNAs play crucial roles in non-small-cell lung cancer (NSCLC) but there have been no systematic studies regarding NETs-related long noncoding RNA (lncRNA) signatures to forecast the prognosis of NSCLC patients. It's essential to build commensurate NETs-related lncRNA signatures. The expression profiles of prognostic mRNAs and lncRNAs and relevant clinical data of NSCLC patients were downloaded from The Cancer Genome Atlas (TCGA) database. The NETs-related genes came from the results of our transcriptome RNA microarray data. The co-expression network of lncRNAs and NETs-related genes was structured to confirm NETs-related lncRNAs. The 19 lncRNAs correlated with overall survival (OS) were selected by exploiting univariate Cox regression (P < 0.05). Lasso regression and multivariate Cox regression (P < 0.05) were utilized to develop a 12-NETs-related lncRNA signature. We established a risk score based on the signature, which suggested that patients in the high-risk group displayed significantly shorter OS than patients in the low-risk group (P < 0.0001, P = 0.0023 respectively in the two cohorts). The risk score worked as an independent predictive factor for OS in both univariate and multivariate Cox regression analyses (HR> 1, P< 0.001). Additionally, by RT-qPCR, we confirmed that NSCLC cell lines have higher levels of the three adverse prognostic NETs-related lncRNAs than normal lung cells. The expression of lncRNAs significantly increases after NETs stimulation. In short, the 12 NETs-related lncRNAs and their model could play effective roles as molecular markers in predicting survival for NSCLC patients.

Entities:  

Keywords:  lncRNA; neutrophil extracellular traps; non-small-cell lung cancer; prognosis

Year:  2021        PMID: 34257164     DOI: 10.18632/aging.203289

Source DB:  PubMed          Journal:  Aging (Albany NY)        ISSN: 1945-4589            Impact factor:   5.682


  4 in total

1.  Neutrophil Extracellular Traps (NETs) Promote Non-Small Cell Lung Cancer Metastasis by Suppressing lncRNA MIR503HG to Activate the NF-κB/NLRP3 Inflammasome Pathway.

Authors:  Yong Wang; Fen Liu; Lin Chen; Chen Fang; Shuangyan Li; Shangkun Yuan; Xiaoying Qian; Yan Yin; Biao Yu; Biqi Fu; Xinwei Zhang; Yong Li
Journal:  Front Immunol       Date:  2022-05-30       Impact factor: 8.786

2.  A Novel Immune-Related Gene Signature Predicts Prognosis of Lung Adenocarcinoma.

Authors:  Chao Ma; Feng Li; Ziming Wang; Huan Luo
Journal:  Biomed Res Int       Date:  2022-04-09       Impact factor: 3.246

3.  Predicting the Immune Microenvironment and Prognosis with a NETosis-Related lncRNA Signature in Head and Neck Squamous Cell Carcinoma.

Authors:  Xiaohua He; Yinglu Xiao; Shan Liu; Ruyan Deng; Zhiming Li; Xianying Zhu
Journal:  Biomed Res Int       Date:  2022-09-12       Impact factor: 3.246

4.  Tumor microenvironment gene expression profiles associated to complete pathological response and disease progression in resectable NSCLC patients treated with neoadjuvant chemoimmunotherapy.

Authors:  Marta Casarrubios; Mariano Provencio; Ernest Nadal; Amelia Insa; María Del Rosario García-Campelo; Martín Lázaro-Quintela; Manuel Dómine; Margarita Majem; Delvys Rodriguez-Abreu; Alex Martinez-Marti; Javier De Castro Carpeño; Manuel Cobo; Guillermo López Vivanco; Edel Del Barco; Reyes Bernabé; Nuria Viñolas; Isidoro Barneto Aranda; Bartomeu Massuti; Belén Sierra-Rodero; Cristina Martinez-Toledo; Ismael Fernández-Miranda; Roberto Serna-Blanco; Atocha Romero; Virginia Calvo; Alberto Cruz-Bermúdez
Journal:  J Immunother Cancer       Date:  2022-09       Impact factor: 12.469

  4 in total

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