| Literature DB >> 34249873 |
Rui Ye1,2, Wei Song1,2, Xinwen Ou1, Zonglin Gu3, Dong Zhang2,4.
Abstract
Fresh two-dimensional molybdenum disulfide (MoS2) absorbs the hydrocarbon contaminations in the ambient air and makes surface aging. To understand how the surface aging influences the interactions between MoS2 and biomolecules is important in the biomedical applications. Here, employing all-atom molecular dynamics simulations, we investigated the interactions of the fresh and aged MoS2 nanosheets with the lipid membranes of different components. Our results demonstrate that both the fresh and aged MoS2 nanosheets can spontaneously insert into the bilayer membranes. However, the fresh MoS2 nanosheet displays significantly stronger interaction and then has a larger penetration depth than the aged counterpart, regardless of the lipid components. The calculations of potential mean forces through the umbrella sampling further confirm that the insertion of fresh MoS2 into the lipid membranes is more energetically favorable. Moreover, we found that the fresh MoS2 nanosheet can cause a larger damage to the integrity of lipid membranes than the aged one. This work provides insightful understandings of the surface-aging-dependent interactions of the MoS2 nanosheets with biomembranes, which could facilitate the design of novel MoS2-based nanodevices with advanced surface properties.Entities:
Keywords: MD simulation; MoS2 nanosheet; insertion free energy; lipid membrane; surface aging
Year: 2021 PMID: 34249873 PMCID: PMC8267466 DOI: 10.3389/fchem.2021.706917
Source DB: PubMed Journal: Front Chem ISSN: 2296-2646 Impact factor: 5.221
FIGURE 1Initial configuration of the simulation system. Molybdenum and sulfur atoms are shown as pink and yellow spheres, respectively. The lipids are in the licorice representation. The carbon atoms are shown in cyan, oxygen atoms in red, phosphorus atoms in blue, nitrogen atoms in brown. Water is shown transparently for clarity. Sodium and chlorine ions are displayed by green and purple spheres, respectively.
Experimentally determined WCAs (Kozbial et al., 2015) and the resultant energy parameters from theoretical calculations (Luan and Zhou 2016; Zhang et al., 2019) for the fresh and aged MoS2 nanosheets, respectively. σ and ε are the parameters for the vdW interactions in a CHARMM-like form.
| Name | WCA | Atom |
|
| Charge(e) |
|---|---|---|---|---|---|
| Fresh MoS2 |
| Mo | 0.2551 | 0.5441 | 0.76 |
| S | 0.3550 | 1.6744 | −0.38 | ||
| Aged MoS2 |
| Mo | 0.2551 | 0.5441 | 0.76 |
| S | 0.3550 | 1.0450 | −0.38 |
FIGURE 2MD simulations indicated both the (A) fresh and (B) aged MoS2 nanosheets can insert into the POPE lipid membrane. Final conformations of the MoS2 nanosheets/lipid membrane from five independent simulation runs are shown.
FIGURE 3Insertion processes of the MoS2 nanosheets into the POPE lipid membrane. (A, C) The time-dependent atom contact numbers and surface water molecules for the (A) fresh and (C) aged MoS2 nanosheets. (B, D) The typical conformations of the (B) fresh and (D) aged MoS2 nanosheets during the insertion processes. The dark purple spheres represent the water oxygen atoms.
FIGURE 4Surface aging affects the interactions of MoS2 with the lipid membranes. The time-dependent interaction energies (vdW and Coul energies) between the (A) fresh and (B) aged MoS2 nanosheets and the POPE lipid membrane during the insertion processes. (C) The average atom contact numbers between the fresh/aged MoS2 nanosheets and the head/tail groups of POPE lipid molecules. (D) The average center of mass (CoM) distances between the fresh/aged MoS2 nanosheets and the POPE lipid membrane.
FIGURE 5Free energy changes of the MoS2 nanosheets insertion into the POPE lipid membrane. (A) Potential of mean force (PMF) curves for insertion of the fresh/aged MoS2 nanosheets calculated from umbrella sampling simulations. (B) The representative conformation of the fresh/aged MoS2 nanosheets interacting with the POPE lipid membrane corresponding to the potential wells.
FIGURE 6Insertions of the fresh/aged MoS2 nanosheet cause structural damage to the POPE lipid membrane. (A) The average thickness and (B) lipid tail order of POPE membrane over the last 10ns trajectories from five independent simulations.