Literature DB >> 34248232

Recurrent Events Analysis With Data Collected at Informative Clinical Visits in Electronic Health Records.

Yifei Sun1,2,3,2, Charles E McCulloch1,2,3,2, Kieren A Marr1,2,3,2, Chiung-Yu Huang1,2,3,2.   

Abstract

Although increasingly used as a data resource for assembling cohorts, electronic health records (EHRs) pose many analytic challenges. In particular, a patient's health status influences when and what data are recorded, generating sampling bias in the collected data. In this paper, we consider recurrent event analysis using EHR data. Conventional regression methods for event risk analysis usually require the values of covariates to be observed throughout the follow-up period. In EHR databases, time-dependent covariates are intermittently measured during clinical visits, and the timing of these visits is informative in the sense that it depends on the disease course. Simple methods, such as the last-observation-carried-forward approach, can lead to biased estimation. On the other hand, complex joint models require additional assumptions on the covariate process and cannot be easily extended to handle multiple longitudinal predictors. By incorporating sampling weights derived from estimating the observation time process, we develop a novel estimation procedure based on inverse-rate-weighting and kernel-smoothing for the semiparametric proportional rate model of recurrent events. The proposed methods do not require model specifications for the covariate processes and can easily handle multiple time-dependent covariates. Our methods are applied to a kidney transplant study for illustration.

Entities:  

Keywords:  Electronic health records; Informative observation; Kernel smoothing; Proportional rate model; Recurrent event analysis

Year:  2020        PMID: 34248232      PMCID: PMC8261679          DOI: 10.1080/01621459.2020.1801447

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  17 in total

1.  Analysis of longitudinal data in the presence of informative observational times and a dependent terminal event, with application to medical cost data.

Authors:  Lei Liu; Xuelin Huang; John O'Quigley
Journal:  Biometrics       Date:  2007-12-20       Impact factor: 2.571

2.  Controlling for Informed Presence Bias Due to the Number of Health Encounters in an Electronic Health Record.

Authors:  Benjamin A Goldstein; Nrupen A Bhavsar; Matthew Phelan; Michael J Pencina
Journal:  Am J Epidemiol       Date:  2016-11-16       Impact factor: 4.897

Review 3.  Comparative effectiveness research using the electronic medical record: an emerging area of investigation in pediatric primary care.

Authors:  Alexander G Fiks; Robert W Grundmeier; Benyamin Margolis; Louis M Bell; Jennifer Steffes; James Massey; Richard C Wasserman
Journal:  J Pediatr       Date:  2012-02-24       Impact factor: 4.406

4.  Outcomes after transplantation of deceased-donor kidneys with rising serum creatinine.

Authors:  C Morgan; A Martin; R Shapiro; P S Randhawa; L K Kayler
Journal:  Am J Transplant       Date:  2007-03-12       Impact factor: 8.086

5.  Analysis of the Proportional Hazards Model with Sparse Longitudinal Covariates.

Authors:  Hongyuan Cao; Mathew M Churpek; Donglin Zeng; Jason P Fine
Journal:  J Am Stat Assoc       Date:  2015-11-07       Impact factor: 5.033

6.  Recurrent event data analysis with intermittently observed time-varying covariates.

Authors:  Shanshan Li; Yifei Sun; Chiung-Yu Huang; Dean A Follmann; Richard Krause
Journal:  Stat Med       Date:  2016-02-16       Impact factor: 2.373

Review 7.  Electronic health records: new opportunities for clinical research.

Authors:  P Coorevits; M Sundgren; G O Klein; A Bahr; B Claerhout; C Daniel; M Dugas; D Dupont; A Schmidt; P Singleton; G De Moor; D Kalra
Journal:  J Intern Med       Date:  2013-10-18       Impact factor: 8.989

8.  Methods for estimating kidney disease stage transition probabilities using electronic medical records.

Authors:  Lola Luo; Dylan Small; Walter F Stewart; Jason A Roy
Journal:  EGEMS (Wash DC)       Date:  2013-12-18

9.  Feasibility of extracting data from electronic medical records for research: an international comparative study.

Authors:  Michelle Helena van Velthoven; Nikolaos Mastellos; Azeem Majeed; John O'Donoghue; Josip Car
Journal:  BMC Med Inform Decis Mak       Date:  2016-07-13       Impact factor: 2.796

10.  Illustrating Informed Presence Bias in Electronic Health Records Data: How Patient Interactions with a Health System Can Impact Inference.

Authors:  Matthew Phelan; Nrupen A Bhavsar; Benjamin A Goldstein
Journal:  EGEMS (Wash DC)       Date:  2017-12-06
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  1 in total

1.  Additive-Multiplicative Rates Model for Recurrent Event Data with Intermittently Observed Time-Dependent Covariates.

Authors:  Tianmeng Lyu; Xianghua Luo; Yifei Sun
Journal:  J Data Sci       Date:  2021-11-04
  1 in total

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