Literature DB >> 34246629

Robustness and the evolution of length control strategies in the T3SS and flagellar hook.

Maulik K Nariya1, Abhishek Mallela2, Jack J Shi1, Eric J Deeds3.   

Abstract

Bacterial cells construct many structures, such as the flagellar hook and the type III secretion system (T3SS) injectisome, that aid in crucial physiological processes such as locomotion and pathogenesis. Both of these structures involve long extracellular channels, and the length of these channels must be highly regulated in order for these structures to perform their intended functions. There are two leading models for how length control is achieved in the flagellar hook and T3SS needle: the substrate switching model, in which the length is controlled by assembly of an inner rod, and the ruler model, in which a molecular ruler controls the length. Although there is qualitative experimental evidence to support both models, comparatively little has been done to quantitatively characterize these mechanisms or make detailed predictions that could be used to unambiguously test these mechanisms experimentally. In this work, we constructed a mathematical model of length control based on the ruler mechanism and found that the predictions of this model are consistent with experimental data-not just for the scaling of the average length with the ruler protein length, but also for the variance. Interestingly, we found that the ruler mechanism allows for the evolution of needles with large average lengths without the concomitant large increase in variance that occurs in the substrate switching mechanism. In addition to making further predictions that can be tested experimentally, these findings shed new light on the trade-offs that may have led to the evolution of different length control mechanisms in different bacterial species.
Copyright © 2021. Published by Elsevier Inc.

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Year:  2021        PMID: 34246629      PMCID: PMC8456370          DOI: 10.1016/j.bpj.2021.05.032

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  28 in total

1.  Domain organization and function of Salmonella FliK, a flagellar hook-length control protein.

Authors:  Tohru Minamino; Yumiko Saijo-Hamano; Yukio Furukawa; Bertha González-Pedrajo; Robert M Macnab; Keiichi Namba
Journal:  J Mol Biol       Date:  2004-08-06       Impact factor: 5.469

2.  T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly.

Authors:  Jinhong Hu; Liam J Worrall; Marija Vuckovic; Chuan Hong; Wanyin Deng; Claire E Atkinson; B Brett Finlay; Zhiheng Yu; Natalie C J Strynadka
Journal:  Nat Microbiol       Date:  2019-08-19       Impact factor: 17.745

3.  A repulsive electrostatic mechanism for protein export through the type III secretion apparatus.

Authors:  Thenmalarchelvi Rathinavelan; Lingling Zhang; Wendy L Picking; David D Weis; Roberto N De Guzman; Wonpil Im
Journal:  Biophys J       Date:  2010-02-03       Impact factor: 4.033

4.  An infrequent molecular ruler controls flagellar hook length in Salmonella enterica.

Authors:  Marc Erhardt; Hanna M Singer; Daniel H Wee; James P Keener; Kelly T Hughes
Journal:  EMBO J       Date:  2011-06-07       Impact factor: 11.598

5.  A molecular ruler mechanism for length control of extended protein structures in bacteria.

Authors:  J P Keener
Journal:  J Theor Biol       Date:  2009-12-22       Impact factor: 2.691

6.  Determination of the Stoichiometry of the Complete Bacterial Type III Secretion Needle Complex Using a Combined Quantitative Proteomic Approach.

Authors:  Susann Zilkenat; Mirita Franz-Wachtel; York-Dieter Stierhof; Jorge E Galán; Boris Macek; Samuel Wagner
Journal:  Mol Cell Proteomics       Date:  2016-02-21       Impact factor: 5.911

7.  YscN, the putative energizer of the Yersinia Yop secretion machinery.

Authors:  S Woestyn; A Allaoui; P Wattiau; G R Cornelis
Journal:  J Bacteriol       Date:  1994-03       Impact factor: 3.490

8.  The hrp gene locus of Pseudomonas solanacearum, which controls the production of a type III secretion system, encodes eight proteins related to components of the bacterial flagellar biogenesis complex.

Authors:  F Van Gijsegem; C Gough; C Zischek; E Niqueux; M Arlat; S Genin; P Barberis; S German; P Castello; C Boucher
Journal:  Mol Microbiol       Date:  1995-03       Impact factor: 3.501

9.  Combinatorial complexity and compositional drift in protein interaction networks.

Authors:  Eric J Deeds; Jean Krivine; Jérôme Feret; Vincent Danos; Walter Fontana
Journal:  PLoS One       Date:  2012-03-08       Impact factor: 3.240

10.  Mathematical Model for Length Control by the Timing of Substrate Switching in the Type III Secretion System.

Authors:  Maulik K Nariya; Johnny Israeli; Jack J Shi; Eric J Deeds
Journal:  PLoS Comput Biol       Date:  2016-04-14       Impact factor: 4.475

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