Literature DB >> 34244432

Landscape of innate lymphoid cells in human head and neck cancer reveals divergent NK cell states in the tumor microenvironment.

Uriel Y Moreno-Nieves1, Joshua K Tay1,2, Saumyaa Saumyaa1, Nina B Horowitz1, June Ho Shin1, Imran A Mohammad1, Bogdan Luca3, David C Mundy1, Gunsagar S Gulati3, Nikita Bedi1, Serena Chang1, Chen Chen1, Michael J Kaplan1, Eben L Rosenthal1, F Christopher Holsinger1, Vasu Divi1, Fred M Baik1, Davud B Sirjani1, Andrew J Gentles3, Aaron M Newman3, Aharon G Freud4, John B Sunwoo5.   

Abstract

Natural killer (NK) cells comprise one subset of the innate lymphoid cell (ILC) family. Despite reported antitumor functions of NK cells, their tangible contribution to tumor control in humans remains controversial. This is due to incomplete understanding of the NK cell states within the tumor microenvironment (TME). Here, we demonstrate that peripheral circulating NK cells differentiate down two divergent pathways within the TME, resulting in different end states. One resembles intraepithelial ILC1s (ieILC1) and possesses potent in vivo antitumor activity. The other expresses genes associated with immune hyporesponsiveness and has poor antitumor functional capacity. Interleukin-15 (IL-15) and direct contact between the tumor cells and NK cells are required for the differentiation into CD49a+CD103+ cells, resembling ieILC1s. These data explain the similarity between ieILC1s and tissue-resident NK cells, provide insight into the origin of ieILC1s, and identify the ieILC1-like cell state within the TME to be the NK cell phenotype with the greatest antitumor activity. Because the proportions of the different ILC states vary between tumors, these findings provide a resource for the clinical study of innate immune responses against tumors and the design of novel therapy.

Entities:  

Keywords:  HNSCC; ILC; ieILC1; intratumoral; natural killer cells

Mesh:

Substances:

Year:  2021        PMID: 34244432      PMCID: PMC8285950          DOI: 10.1073/pnas.2101169118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  61 in total

1.  Spatial and Temporal Mapping of Human Innate Lymphoid Cells Reveals Elements of Tissue Specificity.

Authors:  Naomi A Yudanin; Frederike Schmitz; Anne-Laure Flamar; Joseph J C Thome; Elia Tait Wojno; Jesper B Moeller; Melanie Schirmer; Isabel J Latorre; Ramnik J Xavier; Donna L Farber; Laurel A Monticelli; David Artis
Journal:  Immunity       Date:  2019-02-12       Impact factor: 31.745

2.  Genome-wide analysis identifies NR4A1 as a key mediator of T cell dysfunction.

Authors:  Xindong Liu; Yun Wang; Huiping Lu; Jing Li; Xiaowei Yan; Minglu Xiao; Jing Hao; Andrei Alekseev; Hiep Khong; Tenghui Chen; Rui Huang; Jin Wu; Qiwen Zhao; Qi Wu; Senlin Xu; Xiaohu Wang; Wei Jin; Shicang Yu; Yan Wang; Lai Wei; Aibo Wang; Bo Zhong; Ling Ni; Xiaolong Liu; Roza Nurieva; Lilin Ye; Qiang Tian; Xiu-Wu Bian; Chen Dong
Journal:  Nature       Date:  2019-02-27       Impact factor: 49.962

3.  Innate production of T(H)2 cytokines by adipose tissue-associated c-Kit(+)Sca-1(+) lymphoid cells.

Authors:  Kazuyo Moro; Taketo Yamada; Masanobu Tanabe; Tsutomu Takeuchi; Tomokatsu Ikawa; Hiroshi Kawamoto; Jun-Ichi Furusawa; Masashi Ohtani; Hideki Fujii; Shigeo Koyasu
Journal:  Nature       Date:  2009-12-20       Impact factor: 49.962

4.  Integrating single-cell transcriptomic data across different conditions, technologies, and species.

Authors:  Andrew Butler; Paul Hoffman; Peter Smibert; Efthymia Papalexi; Rahul Satija
Journal:  Nat Biotechnol       Date:  2018-04-02       Impact factor: 54.908

5.  TGF-β inhibits the activation and functions of NK cells by repressing the mTOR pathway.

Authors:  Sébastien Viel; Antoine Marçais; Fernando Souza-Fonseca Guimaraes; Roisin Loftus; Jessica Rabilloud; Morgan Grau; Sophie Degouve; Sophia Djebali; Amélien Sanlaville; Emily Charrier; Jacques Bienvenu; Julien C Marie; Christophe Caux; Jacqueline Marvel; Liam Town; Nicholas D Huntington; Laurent Bartholin; David Finlay; Mark J Smyth; Thierry Walzer
Journal:  Sci Signal       Date:  2016-02-16       Impact factor: 8.192

6.  Gene Regulatory Programs Conferring Phenotypic Identities to Human NK Cells.

Authors:  Patrick L Collins; Marina Cella; Sofia I Porter; Shasha Li; Greer L Gurewitz; Henoch S Hong; R Paul Johnson; Eugene M Oltz; Marco Colonna
Journal:  Cell       Date:  2018-12-27       Impact factor: 41.582

7.  Subsets of ILC3-ILC1-like cells generate a diversity spectrum of innate lymphoid cells in human mucosal tissues.

Authors:  Marina Cella; Ramya Gamini; Cristiane Sécca; Patrick L Collins; Shanrong Zhao; Vincent Peng; Michelle L Robinette; Jorge Schettini; Konstantin Zaitsev; William Gordon; Jennifer K Bando; Kentaro Yomogida; Victor Cortez; Catrina Fronick; Robert Fulton; Lih-Ling Lin; Susan Gilfillan; Richard A Flavell; Liang Shan; Maxim N Artyomov; Michael Bowman; Eugene M Oltz; Scott A Jelinsky; Marco Colonna
Journal:  Nat Immunol       Date:  2019-06-17       Impact factor: 25.606

8.  Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation.

Authors:  Davis J McCarthy; Yunshun Chen; Gordon K Smyth
Journal:  Nucleic Acids Res       Date:  2012-01-28       Impact factor: 16.971

9.  The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.

Authors:  Cole Trapnell; Davide Cacchiarelli; Jonna Grimsby; Prapti Pokharel; Shuqiang Li; Michael Morse; Niall J Lennon; Kenneth J Livak; Tarjei S Mikkelsen; John L Rinn
Journal:  Nat Biotechnol       Date:  2014-03-23       Impact factor: 54.908

10.  Batch effects and the effective design of single-cell gene expression studies.

Authors:  Po-Yuan Tung; John D Blischak; Chiaowen Joyce Hsiao; David A Knowles; Jonathan E Burnett; Jonathan K Pritchard; Yoav Gilad
Journal:  Sci Rep       Date:  2017-01-03       Impact factor: 4.379

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  17 in total

1.  Intraepithelial ILC1-like cells: Front-line fighters in human head and neck squamous cell carcinoma.

Authors:  Marina Cella; Michelle L Robinette
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-17       Impact factor: 11.205

2.  Innatus immunis: Evolving paradigm of adaptive NK cells.

Authors:  Mohamed Khalil; Subramaniam Malarkannan
Journal:  J Exp Med       Date:  2022-09-06       Impact factor: 17.579

Review 3.  Immunological Aspects of Human Papilloma Virus-Related Cancers Always Says, "I Am like a Box of Complexity, You Never Know What You Are Gonna Get".

Authors:  Ehsan Soleymaninejadian; Paola Zelini; Irene Cassaniti; Fausto Baldanti; Mattia Dominoni; Andrea Gritti; Barbara Gardella
Journal:  Vaccines (Basel)       Date:  2022-05-06

Review 4.  Innate lymphoid cells and cancer.

Authors:  Nicolas Jacquelot; Cyril Seillet; Eric Vivier; Gabrielle T Belz
Journal:  Nat Immunol       Date:  2022-02-28       Impact factor: 31.250

5.  Cytotoxic granzyme C-expressing ILC1s contribute to antitumor immunity and neonatal autoimmunity.

Authors:  Briana G Nixon; Chun Chou; Chirag Krishna; Saïda Dadi; Adam O Michel; Andrew E Cornish; Emily R Kansler; Mytrang H Do; Xinxin Wang; Kristelle J Capistrano; Alexander Y Rudensky; Christina S Leslie; Ming O Li
Journal:  Sci Immunol       Date:  2022-04-08

Review 6.  Plasticity of Innate Lymphoid Cells in Cancer.

Authors:  Bernd Heinrich; Firouzeh Korangy
Journal:  Front Immunol       Date:  2022-05-19       Impact factor: 8.786

Review 7.  Emerging NK cell therapies for cancer and the promise of next generation engineering of iPSC-derived NK cells.

Authors:  Sainiteesh Maddineni; John L Silberstein; John B Sunwoo
Journal:  J Immunother Cancer       Date:  2022-05       Impact factor: 12.469

Review 8.  Plasticity of NK cells in Cancer.

Authors:  Dillon Corvino; Ananthi Kumar; Tobias Bald
Journal:  Front Immunol       Date:  2022-05-10       Impact factor: 8.786

Review 9.  The Dual Role of Innate Lymphoid and Natural Killer Cells in Cancer. from Phenotype to Single-Cell Transcriptomics, Functions and Clinical Uses.

Authors:  Stefania Roma; Laura Carpen; Alessandro Raveane; Francesco Bertolini
Journal:  Cancers (Basel)       Date:  2021-10-09       Impact factor: 6.639

10.  Transcriptome Analysis of Tumor-Infiltrating Lymphocytes Identifies NK Cell Gene Signatures Associated With Lymphocyte Infiltration and Survival in Soft Tissue Sarcomas.

Authors:  Sean J Judge; Joshua D Bloomstein; Cyrus J Sholevar; Morgan A Darrow; Kevin M Stoffel; Logan V Vick; Cordelia Dunai; Sylvia M Cruz; Aryana M Razmara; Arta M Monjazeb; Robert B Rebhun; William J Murphy; Robert J Canter
Journal:  Front Immunol       Date:  2022-07-07       Impact factor: 8.786

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