Literature DB >> 34242503

Mapping the Molecular Architecture Required for Lipid-Binding Pockets Using a Subset of Established and Orphan G-Protein Coupled Receptors.

Shanthi Nagarajan1,2, Zu Yuan Qian1,3, Parthiban Marimuthu4, Nabil J Alkayed1,3, Sanjiv Kaul1, Anthony P Barnes1,3.   

Abstract

G-protein coupled receptors (GPCRs) sense a wide variety of stimuli, including lipids, and transduce signals to the intracellular environment to exert various physiological responses. However, the structural features of GPCRs responsible for detecting and triggering responses to distinct lipid ligands have only recently begun to be revealed. 14,15-epoxyeicosatrienoic acid (14,15-EET) is one such lipid mediator that plays an essential role in the vascular system, displaying both vasodilatory and anti-inflammatory properties. We recently reported multiple low-affinity 14,15-EET-binding GPCRs, but the mechanism by which these receptors sense 14,15-EET remains unclear. Here, we have taken a combined computational and experimental approach to identify and confirm critical residues and properties within the lipid-binding pocket. Furthermore, we generated mutants to engineer selected GPCR-predicted binding sites to either confer or abolish 14,15-EET-induced signaling. Our structure-function analyses indicate that hydrophobic and positively charged residues of the receptor-binding pocket are prerequisites for recognizing lipid ligands such as 14,15-EET and possibly other eicosanoids.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 34242503      PMCID: PMC8630984          DOI: 10.1021/acs.jcim.1c00335

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   6.162


  66 in total

1.  Properties of chimeric prostacyclin/prostaglandin D2 receptors: site-directed mutagenesis reveals the significance of the isoleucine residue at position 323.

Authors:  Helen Wise; Kevin B S Chow; Kam Yiu Wing; Takuya Kobayashi; Dicky L Y Tse; Christopher H K Cheng
Journal:  J Recept Signal Transduct Res       Date:  2003-02       Impact factor: 2.092

2.  Resolvin D1 receptor stereoselectivity and regulation of inflammation and proresolving microRNAs.

Authors:  Sriram Krishnamoorthy; Antonio Recchiuti; Nan Chiang; Gabrielle Fredman; Charles N Serhan
Journal:  Am J Pathol       Date:  2012-03-23       Impact factor: 4.307

3.  High-resolution structure of the human GPR40 receptor bound to allosteric agonist TAK-875.

Authors:  Ankita Srivastava; Jason Yano; Yoshihiko Hirozane; Georgia Kefala; Franz Gruswitz; Gyorgy Snell; Weston Lane; Anthony Ivetac; Kathleen Aertgeerts; Jasmine Nguyen; Andy Jennings; Kengo Okada
Journal:  Nature       Date:  2014-07-20       Impact factor: 49.962

4.  Characterization of 14,15-epoxyeicosatrienoyl-sulfonamides as 14,15-epoxyeicosatrienoic acid agonists: use for studies of metabolism and ligand binding.

Authors:  Wenqi Yang; Blythe B Holmes; V Raj Gopal; R V Krishna Kishore; Bhavani Sangras; Xiu-Yu Yi; J R Falck; William B Campbell
Journal:  J Pharmacol Exp Ther       Date:  2007-02-27       Impact factor: 4.030

5.  Sphingosine 1-phosphate and dioleoylphosphatidic acid are low affinity agonists for the orphan receptor GPR63.

Authors:  Anke Niedernberg; Sorin Tunaru; Andree Blaukat; Ali Ardati; Evi Kostenis
Journal:  Cell Signal       Date:  2003-04       Impact factor: 4.315

Review 6.  Functional lipids and the prevention of the metabolic syndrome.

Authors:  Teruyoshi Yanagita; Koji Nagao
Journal:  Asia Pac J Clin Nutr       Date:  2008       Impact factor: 1.662

7.  Structural requirements for activation of the 5-oxo-6E,8Z, 11Z,14Z-eicosatetraenoic acid (5-oxo-ETE) receptor: identification of a mead acid metabolite with potent agonist activity.

Authors:  Pranav Patel; Chantal Cossette; Jaganmohan R Anumolu; Sylvie Gravel; Alain Lesimple; Orval A Mamer; Joshua Rokach; William S Powell
Journal:  J Pharmacol Exp Ther       Date:  2008-02-21       Impact factor: 4.030

8.  Cloning, expression, and characterization of the human eosinophil eotaxin receptor.

Authors:  B L Daugherty; S J Siciliano; J A DeMartino; L Malkowitz; A Sirotina; M S Springer
Journal:  J Exp Med       Date:  1996-05-01       Impact factor: 14.307

9.  Ligand chain length drives activation of lipid G protein-coupled receptors.

Authors:  Anastassia Troupiotis-Tsaïlaki; Julian Zachmann; Inés González-Gil; Angel Gonzalez; Silvia Ortega-Gutiérrez; Maria L López-Rodríguez; Leonardo Pardo; Cedric Govaerts
Journal:  Sci Rep       Date:  2017-05-17       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.